Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p14
(222 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 78 4e-14
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 77 1e-13
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 74 7e-13
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 69 2e-11
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 62 3e-09
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 61 4e-09
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 57 7e-08
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 48 4e-05
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 39 0.019
UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15; Eurya... 33 1.3
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 33 1.7
UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin ... 32 2.2
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 2.2
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;... 32 2.9
UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus... 31 5.0
UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whol... 31 6.7
UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome sh... 31 6.7
UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein; ... 31 6.7
UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 6.7
UniRef50_Q174M7 Cluster: Transient receptor potential cation cha... 31 6.7
UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis... 30 8.8
UniRef50_Q5CQT1 Cluster: Large low complexity protein with signa... 30 8.8
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 77.8 bits (183), Expect = 4e-14
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF+KK
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKK 59
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 76.6 bits (180), Expect = 1e-13
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF+KK
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKK 59
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 73.7 bits (173), Expect = 7e-13
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXX-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF+KK
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 48 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
VNVPK ++TY +QYKK K+ AAQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 61.7 bits (143), Expect = 3e-09
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MV P+ ++ Y +YK K AQG+RRYDRKQQGYGGQ+KP+F+K+
Sbjct: 1 MVKYPRNQKKYCKFCKVHVEMKSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQ 59
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 61.3 bits (142), Expect = 4e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
QYKK K+ QG+RRYDRKQQG+GGQ+KP+FKKK
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVFKKK 43
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 57.2 bits (132), Expect = 7e-08
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKK 218
MV+ PK ++ + SQ + +ERH+A GRRRYDRKQ+G+GG+ KPI ++
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALGRRRYDRKQKGFGGRVKPILRR 58
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 48.0 bits (109), Expect = 4e-05
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +3
Query: 57 PKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKK 218
PK+ RTY +QY+ K R A G RRY RKQ+GYG Q +P K+
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRPEQKR 57
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +3
Query: 57 PKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKK 218
PKQ R Y S YK K R +A G RR+ ++GYGGQ P K
Sbjct: 4 PKQIRRYCPKCKKHTTQKVSIYKAGKRRASAIGERRHAEDKKGYGGQKFPKLAK 57
>UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15;
Euryarchaeota|Rep: 50S ribosomal protein L44E -
Pyrococcus horikoshii
Length = 94
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 57 PKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKP 206
PKQ RTY + K+ + G+RR+ R +GYGG +P
Sbjct: 4 PKQIRTYCPYCKRHTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRP 53
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 48 VNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFK 215
+ +PK+ TY + +K K G+RR+ R GYGG +P F+
Sbjct: 1 MKMPKKIMTYCPYCKKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFE 56
>UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin
specific protease 34; n=1; Apis mellifera|Rep: PREDICTED:
similar to ubiquitin specific protease 34 - Apis
mellifera
Length = 3414
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 207 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPFLSSF 31
W+W D+ + + D N+F F W C IP L I + A L S F+ +F
Sbjct: 2236 WIWQDNMH-FLQDKNIFEHTYFTFMWQICGYIPQTLFSIQSDITEMSADLSTSFFMETF 2293
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -3
Query: 139 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 50
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 126 FCTVIPCVLCGIYIFCSTSC 67
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;
Dikarya|Rep: E3 ubiquitin-protein ligase RSP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 809
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 61 NSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVM 168
N++ T N ++T TR HST P +GT VE +
Sbjct: 158 NTSSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTL 193
>UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus
Ellin6076|Rep: Peptidase M50 - Solibacter usitatus
(strain Ellin6076)
Length = 321
Score = 31.1 bits (67), Expect = 5.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 204 VWTDHRNPAVYDHNVFYPGQRAFPW 130
+W R+P++YD + PG+R W
Sbjct: 277 LWLGRRHPSIYDSTILSPGRRKLGW 301
>UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10033,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1494
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 207 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 100
W+W D+ N + D N+F F W C+ IP L
Sbjct: 65 WIWHDN-NQFLQDKNIFEHTYFGFMWQLCSSIPSSL 99
>UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF13760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 103
Score = 30.7 bits (66), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 142 CLSLDFLYCDTLCTLWHLHFL 80
C S D L+C +C WH+ +L
Sbjct: 70 CCSFDALFCILMCVFWHVRYL 90
>UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein;
n=2; Synechococcus|Rep: Possible peptidase S26 family
protein - Synechococcus sp. (strain CC9902)
Length = 127
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 118 STKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSK 216
ST S + G +PR + +V SRVT NPS+K
Sbjct: 80 STDSRQLGPIPRSALIGVVTSRVTPAKKNPSTK 112
>UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=5; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
5 - Inversidens japanensis
Length = 588
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 145 ACLSLDFLYCDTLCTLWHLHFLQYVLRC-FGTFTIFEFVRHDINK 14
ACL LD L TL HL F+ YVL + ++F + H + K
Sbjct: 271 ACLELDIKKLVALSTLSHLGFMVYVLGVGYPVLSVFHLLSHALFK 315
>UniRef50_Q174M7 Cluster: Transient receptor potential cation
channel protein painless; n=2; Aedes aegypti|Rep:
Transient receptor potential cation channel protein
painless - Aedes aegypti (Yellowfever mosquito)
Length = 914
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 160 LLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDI 20
L+ W LSL F +CT + L F YV+ C+G + +F++ +
Sbjct: 495 LIKWLR-LSLYFYINFVICTCFFLCFTWYVVGCYGQDNVDQFLKESL 540
>UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis
virus a|Rep: FirrV-1-E5 - Feldmannia irregularis virus a
Length = 128
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 106 TRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKKK 222
TR +TKS R +P + +M R+ +++ PS+KK+
Sbjct: 4 TRSMATKSRRTAPMPTYDQLMAHAKRIALITKPPSAKKR 42
>UniRef50_Q5CQT1 Cluster: Large low complexity protein with signal
peptide, within large locus of signal peptide containing
proteins; n=3; Cryptosporidium|Rep: Large low complexity
protein with signal peptide, within large locus of
signal peptide containing proteins - Cryptosporidium
parvum Iowa II
Length = 2929
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +1
Query: 58 QNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKK 219
+ S G ++N N + + HS + P+K LP+ ++ + + + +P +K+
Sbjct: 357 ETSEGEVSENENGKRNNKRHSKRRPKKPKLPKKWEIFTDDEKQEWLDRHPRTKR 410
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,250,835
Number of Sequences: 1657284
Number of extensions: 3404353
Number of successful extensions: 10573
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10571
length of database: 575,637,011
effective HSP length: 52
effective length of database: 489,458,243
effective search space used: 10278623103
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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