Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p14
(222 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 70 2e-13
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 70 2e-13
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 70 2e-13
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 68 9e-13
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 68 9e-13
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 68 9e-13
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 68 9e-13
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 0.51
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 29 0.67
01_01_1106 + 8750597-8754031 28 0.89
05_05_0226 + 23442971-23443857,23444209-23446324 28 1.2
11_06_0050 + 19631164-19631987,19632103-19634023 27 1.5
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 27 2.7
11_01_0266 - 2010572-2011879 26 3.6
06_01_0302 + 2188905-2188989,2189309-2189406,2189487-2189753,218... 26 4.7
01_06_0512 + 29942429-29942929 26 4.7
12_02_0879 + 23960084-23961551,23961796-23962184 25 6.2
07_03_0146 + 14389350-14390372 25 6.2
02_02_0338 + 9105725-9106581,9106950-9107091 25 6.2
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 25 8.3
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 70.1 bits (164), Expect = 2e-13
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKK 218
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F K
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 219 K 221
K
Sbjct: 61 K 61
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 70.1 bits (164), Expect = 2e-13
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKK 218
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F K
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 219 K 221
K
Sbjct: 61 K 61
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 70.1 bits (164), Expect = 2e-13
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKK 218
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F K
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 219 K 221
K
Sbjct: 61 K 61
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 68.1 bits (159), Expect = 9e-13
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 48 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 68.1 bits (159), Expect = 9e-13
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 48 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 68.1 bits (159), Expect = 9e-13
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 48 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 68.1 bits (159), Expect = 9e-13
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 48 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F KK
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 29.1 bits (62), Expect = 0.51
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 118 STKSPRKGTLPRVEDVMIVNSRV 186
++ SP+K T PRVED M++ S +
Sbjct: 451 ASSSPQKQTAPRVEDDMVITSSI 473
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 64 SAGRTAKNVNATKYTRYHSTKSPRKGTLPR 153
S+GRTA++ + R+H T RKG LPR
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG-LPR 127
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 28.3 bits (60), Expect = 0.89
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -3
Query: 175 LRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRC 62
L+S LL C +L+ L DT+C+L +LHFL + RC
Sbjct: 540 LQSLHLLNLKGCGNLEILP-DTICSLQNLHFLN-LSRC 575
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 163 RLLPWAACLSLDFLYCDTLCTLWHLHFLQY 74
R+L C LD + +C LWHL +L +
Sbjct: 595 RVLDLQECSDLDDDHLKYICKLWHLKYLSF 624
>11_06_0050 + 19631164-19631987,19632103-19634023
Length = 914
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 163 RLLPWAACLSLDFLYCDTLCTLWHLHFLQ 77
R+L ++ C ++ +C +C L+HL +L+
Sbjct: 577 RVLDFSGCDKVENQHCKDICKLFHLRYLR 605
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 94 ATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSS 213
+T T + + K P G++ + NS V +V P PS+
Sbjct: 821 STNITNFANLKEPFDGSIDLANVENVTNSNVVMVQPVPST 860
>11_01_0266 - 2010572-2011879
Length = 435
Score = 26.2 bits (55), Expect = 3.6
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 114 SQYKKSKERHAAQGRRRYDR 173
S+ +K+++RH A+G+ YD+
Sbjct: 3 SEKRKTRDRHGARGKASYDK 22
>06_01_0302 +
2188905-2188989,2189309-2189406,2189487-2189753,
2189906-2189947,2190071-2190078,2190230-2190273,
2190615-2190695,2190779-2190907,2191017-2191114,
2191188-2191448,2191537-2191581,2191748-2191881,
2191965-2192045,2192127-2192308,2192632-2192746,
2192873-2193056,2193144-2193329
Length = 679
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 163 RLLPWAACLSLDFLYCDTLCTLWHLHF 83
RL+PW L FL C T C + L +
Sbjct: 349 RLVPWTGTLDCQFLACST-CKITKLKY 374
>01_06_0512 + 29942429-29942929
Length = 166
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 144 RAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPF 43
RA W V+PC + G Y+ S A S F
Sbjct: 18 RAQVWACAVVVPCFIVGAYLAESYGAAAAASSFF 51
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 25.4 bits (53), Expect = 6.2
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 52 TYQNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVV--SPNPSSKKK 222
T ++S G +K V ATK+ R +S +P+V+++ V S TV+ S P+ + K
Sbjct: 315 TIESSNG--SKVVRATKFNRDKKFRSTVASNVPKVKEIK-VTSPATVMDQSSKPTRQSK 370
>07_03_0146 + 14389350-14390372
Length = 340
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 64 SAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPS 210
++G NV T+Y R + + +G +P + ++++ +VT VSPNPS
Sbjct: 7 TSGNGLNNVT-TQYFR--TDQGVVRGNVPLPQ--VVISPKVTFVSPNPS 50
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQQGYGGQS 200
QY++ +++ A +R+Y R + G GG S
Sbjct: 57 QYRQQQQQQPANRKRQYGRHRGGGGGCS 84
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +3
Query: 57 PKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSK 203
P + R Y + K RH+A+ + RY R+ Q Y + K
Sbjct: 250 PHREREYSRMIGDAWNRLAADDKMVYYRHSAEDKERYKREMQEYNERLK 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,625,377
Number of Sequences: 37544
Number of extensions: 94628
Number of successful extensions: 325
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 14,793,348
effective HSP length: 53
effective length of database: 12,803,516
effective search space used: 256070320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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