BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p14
(222 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029953-1|ABM92827.1| 104|Drosophila melanogaster IP17351p pro... 87 2e-18
AE014134-1388|AAF52596.2| 104|Drosophila melanogaster CG7424-PA... 87 2e-18
BT024261-1|ABC86323.1| 121|Drosophila melanogaster IP15820p pro... 71 3e-13
BT011125-1|AAR82792.1| 1030|Drosophila melanogaster LD07466p pro... 27 3.5
AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p pro... 27 3.5
AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA... 27 3.5
BT010215-1|AAQ23533.1| 752|Drosophila melanogaster RH20440p pro... 26 8.2
AY047519-1|AAK77251.1| 466|Drosophila melanogaster GH02741p pro... 26 8.2
AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-P... 26 8.2
AE013599-3250|AAM70929.1| 466|Drosophila melanogaster CG9865-PB... 26 8.2
AE013599-3249|AAM70928.1| 466|Drosophila melanogaster CG9865-PA... 26 8.2
>BT029953-1|ABM92827.1| 104|Drosophila melanogaster IP17351p
protein.
Length = 104
Score = 87.4 bits (207), Expect = 2e-18
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPKQRRT+ +QYKKSKER AQGRRRYDRKQQG+GGQ+KPIF+KK
Sbjct: 1 MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKK 59
>AE014134-1388|AAF52596.2| 104|Drosophila melanogaster CG7424-PA
protein.
Length = 104
Score = 87.4 bits (207), Expect = 2e-18
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPKQRRT+ +QYKKSKER AQGRRRYDRKQQG+GGQ+KPIF+KK
Sbjct: 1 MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKK 59
>BT024261-1|ABC86323.1| 121|Drosophila melanogaster IP15820p
protein.
Length = 121
Score = 70.5 bits (165), Expect = 3e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3
Query: 114 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
+QYKKSKER AQGRRRYDRKQQG+GGQ+KPIF+KK
Sbjct: 41 TQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKK 76
>BT011125-1|AAR82792.1| 1030|Drosophila melanogaster LD07466p
protein.
Length = 1030
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 148 AACLSLDFLYCDTLCTLWHLH 86
A C S D L D C WH H
Sbjct: 272 AKCYSQDLLVYDVYCDSWHYH 292
>AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p
protein.
Length = 1232
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 148 AACLSLDFLYCDTLCTLWHLH 86
A C S D L D C WH H
Sbjct: 474 AKCYSQDLLVYDVYCDSWHYH 494
>AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA
protein.
Length = 1284
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 148 AACLSLDFLYCDTLCTLWHLH 86
A C S D L D C WH H
Sbjct: 526 AKCYSQDLLVYDVYCDSWHYH 546
>BT010215-1|AAQ23533.1| 752|Drosophila melanogaster RH20440p
protein.
Length = 752
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 88 HFLQYVLRCFGTFTIFEFVRHDINKRQRE 2
+F+ Y R TIFEF++ D+NK Q E
Sbjct: 344 YFVSYAQRVSEKDTIFEFIK-DLNKLQVE 371
>AY047519-1|AAK77251.1| 466|Drosophila melanogaster GH02741p
protein.
Length = 466
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 184 PCCLRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFV 32
P CL + ++L W C L FL+ LW L Y+L F T+ F ++
Sbjct: 385 PLCLNNFKMLSWRRCFGLLFLWL-LAQALWLLP--AYLLE-FHTWNTFYWI 431
>AE014297-4720|AAF57130.2| 357|Drosophila melanogaster CG15561-PA
protein.
Length = 357
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 123 KKSKERHAAQGRRRYD 170
KK+KE+HA+ G+ YD
Sbjct: 99 KKAKEQHASDGKATYD 114
>AE013599-3250|AAM70929.1| 466|Drosophila melanogaster CG9865-PB,
isoform B protein.
Length = 466
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 184 PCCLRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFV 32
P CL + ++L W C L FL+ LW L Y+L F T+ F ++
Sbjct: 385 PLCLNNFKMLSWRRCFGLLFLWL-LAQALWLLP--AYLLE-FHTWNTFYWI 431
>AE013599-3249|AAM70928.1| 466|Drosophila melanogaster CG9865-PA,
isoform A protein.
Length = 466
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 184 PCCLRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFV 32
P CL + ++L W C L FL+ LW L Y+L F T+ F ++
Sbjct: 385 PLCLNNFKMLSWRRCFGLLFLWL-LAQALWLLP--AYLLE-FHTWNTFYWI 431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,412,007
Number of Sequences: 53049
Number of extensions: 162266
Number of successful extensions: 572
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 53
effective length of database: 22,176,771
effective search space used: 443535420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -