Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p14
(222 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical pr... 74 2e-14
AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal... 74 2e-14
AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical ... 27 1.8
Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical pr... 27 2.4
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 2.4
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 2.4
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z74029-3|CAE17749.1| 113|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical pr... 25 5.5
AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine re... 25 5.5
AC006610-6|AAK85452.1| 395|Caenorhabditis elegans Hypothetical ... 25 5.5
Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical p... 25 7.3
U97405-11|AAB53004.1| 672|Caenorhabditis elegans Hypothetical p... 25 7.3
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 25 7.3
AF036701-1|AAB88368.2| 332|Caenorhabditis elegans Kinase, glh-b... 25 7.3
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 25 7.3
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 25 9.6
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 25 9.6
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 25 9.6
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 25 9.6
>Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical
protein C09H10.2 protein.
Length = 105
Score = 73.7 bits (173), Expect = 2e-14
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXX-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF+KK
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
>AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal
protein L44 L41 protein.
Length = 105
Score = 73.7 bits (173), Expect = 2e-14
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +3
Query: 45 MVNVPKQRRTYXXXXXXXXXXXX-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFKKK 221
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF+KK
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
>AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical
protein D1079.1 protein.
Length = 113
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -1
Query: 147 QRAFPW-TFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNV 10
QR++P+ TF + +LC +YI C S +V + FL +F + +NV
Sbjct: 30 QRSYPFQTFLAFLDFMLCALYIHCFGLLSISVEYKIAFLYNF-VMDSNV 77
>Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical
protein T02D1.6 protein.
Length = 433
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 195 DHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLV 55
+H V+ NV+ P Q P V+ VLC I C S + +
Sbjct: 38 NHTGGPVWVRNVYPPIQELQPKVLIVVVVFVLCFIVGVCGNSSIITI 84
>Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical
protein F10C2.4 protein.
Length = 1081
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 109 RYHSTKSPRKGTLPRV-EDVMIVNSR 183
+Y +TKS R+G LP + ED++ R
Sbjct: 612 QYFATKSKRRGLLPEILEDILAARKR 637
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 133 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 38
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 133 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 38
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 114 IPCVLCGIYIFCSTSCAVLVRSPFLSSFGTI 22
IPC++ GIYI + ++ +S SS TI
Sbjct: 233 IPCIIFGIYIALTIKIMIMKQSSLKSSEITI 263
>Z74029-3|CAE17749.1| 113|Caenorhabditis elegans Hypothetical
protein C45B11.5 protein.
Length = 113
Score = 25.8 bits (54), Expect = 4.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 126 FCTVIPCVLCGIYIFCSTSCAVLVR 52
FC V+ + GI++ C C +R
Sbjct: 25 FCLVVTFITIGIFLLCGAWCIYAIR 49
>Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical
protein R186.5 protein.
Length = 479
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 127 FLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDIN 17
F+Y +T+C +W ++ + R + FE++R +N
Sbjct: 234 FMYIETICNIWFT--IEILARFSSCPSRFEYLRAPVN 268
>AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine
receptor, class x protein67 protein.
Length = 297
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 129 TFCTVIPCVLCGIYIFCSTSCAVLVRSPFLSSFGTISTN 13
T +IP G + CS A+ P +SFG +S N
Sbjct: 7 TAIALIPITFIGAVLNCSILYAIHKLPPLKNSFGCLSFN 45
>AC006610-6|AAK85452.1| 395|Caenorhabditis elegans Hypothetical
protein C30F12.6 protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = -1
Query: 129 TFCTV--IPCVLCGIYIF 82
T CTV C++CGI+IF
Sbjct: 144 TMCTVKRATCIICGIWIF 161
>Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical
protein C47E12.11 protein.
Length = 366
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 58 QNSAGRTAKNVNATKYTRYHSTKS 129
+ SAG TAK+ N TK + TKS
Sbjct: 66 RQSAGSTAKSKNKTKSEKSKKTKS 89
>U97405-11|AAB53004.1| 672|Caenorhabditis elegans Hypothetical
protein T09B4.1 protein.
Length = 672
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 147 QRAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPFL 40
++ F WT CV I I C+ S +L +P++
Sbjct: 408 RKVFRWTDPNFSRCVTLFIVIVCAISATLLFFTPYV 443
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 61 NSAGRTAKNVNATKYTRYHSTKSPR 135
+ +GR++K+ N+TK T S+KS R
Sbjct: 67 SKSGRSSKSSNSTKTTGSKSSKSSR 91
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 106 TRYHSTKSPRKGTLPRVEDVMIVNS 180
TRY + + G LPR+ DV+++NS
Sbjct: 1126 TRYMVADADKSG-LPRIVDVILINS 1149
>AF036701-1|AAB88368.2| 332|Caenorhabditis elegans Kinase,
glh-binding protein 2 protein.
Length = 332
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 136 SLDFLYCDTLCTLWHLHFLQYVLR 65
+L FL +LC + HLH L ++ R
Sbjct: 131 TLSFLVYQSLCAIKHLHNLGFIHR 154
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 106 TRYHSTKSPRKGTLPRVEDVMIVNS 180
TRY + + G LPR+ DV+++NS
Sbjct: 1124 TRYMVADADKSG-LPRIVDVILINS 1147
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 5 SLTFVDIVPNELKNGERTKTAQDV 76
SLTF DI L GE K +D+
Sbjct: 390 SLTFTDINNQTLSEGEIVKVVEDI 413
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 123 KKSKER--HAAQGRRRYDRKQQGYGGQS 200
+KSKE H GRR DR+ GG+S
Sbjct: 424 EKSKETKDHRESGRRLTDREANAVGGKS 451
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -1
Query: 129 TFCTVIPCVLCGIYIFCSTSCAVLV 55
T T C++ G++I +++CA+L+
Sbjct: 430 TSSTAKMCLIIGLFILIASTCAILM 454
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 93 IYIFCSTSCAVLVRSPF 43
IY C TSC +L SPF
Sbjct: 392 IYFICVTSCFLLRPSPF 408
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,923,742
Number of Sequences: 27780
Number of extensions: 87787
Number of successful extensions: 348
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 53
effective length of database: 11,267,858
effective search space used: 225357160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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