BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p14
(222 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 1.4
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 1.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 1.8
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 2.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 2.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 2.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 4.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 4.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 19 5.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 19 5.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 19 5.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 7.2
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 19 7.2
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 19 7.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 19 7.2
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 19 7.2
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 19 9.5
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 19 9.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 19 9.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 19 9.5
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 19 9.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 9.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 9.5
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.4 bits (43), Expect = 1.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 159 RRYDRKQQGYGGQSKPIFKKK 221
R + K++ GG+ KPI KK+
Sbjct: 5 RDHWHKRRATGGKRKPIRKKR 25
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 1.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 175 NSRVTVVSPNPSSKK 219
N R TVVSP P+ ++
Sbjct: 896 NQRGTVVSPPPTKRR 910
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 1.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 175 NSRVTVVSPNPSSKK 219
N R TVVSP P+ ++
Sbjct: 934 NQRGTVVSPPPTKRR 948
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 2.4
Identities = 8/26 (30%), Positives = 11/26 (42%)
Frame = -1
Query: 186 NPAVYDHNVFYPGQRAFPWTFCTVIP 109
NP + + + P TFC V P
Sbjct: 191 NPMIAELETLSVEPKVSPMTFCRVFP 216
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 20.6 bits (41), Expect = 2.4
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +1
Query: 43 KW*TYQNSAGRTAKNVNATKYTRYHSTKSPRK 138
+W TYQ + N KY Y ++ P +
Sbjct: 394 RWFTYQETVDPAGCNAGPAKY--YLKSRDPER 423
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 2.4
Identities = 8/26 (30%), Positives = 11/26 (42%)
Frame = -1
Query: 186 NPAVYDHNVFYPGQRAFPWTFCTVIP 109
NP + + + P TFC V P
Sbjct: 191 NPMIAELETLSVEPKVSPMTFCRVFP 216
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 19.8 bits (39), Expect = 4.1
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = -1
Query: 219 FF*RWVWTDH 190
F W+WT H
Sbjct: 172 FLIHWIWTPH 181
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.8 bits (39), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQ 179
+Y+K +ER + R R +R++
Sbjct: 288 EYRKYRERSKERSRDRTERER 308
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 5.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQ 179
+Y+K +ER + R R +R++
Sbjct: 55 KYRKYRERSKERSRDRTERER 75
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 19.4 bits (38), Expect = 5.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQ 179
+Y+K +ER + R R +R++
Sbjct: 55 KYRKYRERSKERSRDRTERER 75
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.4 bits (38), Expect = 5.5
Identities = 5/15 (33%), Positives = 9/15 (60%)
Frame = -1
Query: 129 TFCTVIPCVLCGIYI 85
+FC V+ C +Y+
Sbjct: 152 SFCVVLACSTATVYV 166
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.0 bits (37), Expect = 7.2
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +1
Query: 73 RTAKNVNATKYTRYH 117
+ +N A YT+YH
Sbjct: 712 QAVRNYYANLYTKYH 726
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 19.0 bits (37), Expect = 7.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 127 FLYCDTLCTLWHLHFLQY 74
F Y D L + + LH L++
Sbjct: 352 FFYPDPLASKYELHGLKF 369
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 19.0 bits (37), Expect = 7.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 120 TVIPCVLCGIYIFCSTSCAVLV 55
++IP V+ GI AVL+
Sbjct: 54 SIIPVVMAGIIAIYGLVVAVLI 75
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 19.0 bits (37), Expect = 7.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 41 KNGERTKTAQDVL 79
KNG+ TK D+L
Sbjct: 28 KNGDYTKIMPDIL 40
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 19.0 bits (37), Expect = 7.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +3
Query: 138 RHAAQGRRRYDRKQQGYGGQ 197
+++ Q R YDR+ + + G+
Sbjct: 289 KNSGQWLREYDRELEDFDGR 308
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 18.6 bits (36), Expect = 9.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 165 NVFYPGQRAFP 133
NV PG+R FP
Sbjct: 25 NVPQPGRRPFP 35
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 18.6 bits (36), Expect = 9.5
Identities = 5/15 (33%), Positives = 9/15 (60%)
Frame = -1
Query: 117 VIPCVLCGIYIFCST 73
+I C++C + C T
Sbjct: 10 LITCLICSPSVHCGT 24
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 18.6 bits (36), Expect = 9.5
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQ 179
+Y+K +ER + R + +R++
Sbjct: 55 EYRKYRERSKERSRDKRERER 75
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 18.6 bits (36), Expect = 9.5
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +3
Query: 117 QYKKSKERHAAQGRRRYDRKQ 179
+Y+K +ER + R + +R++
Sbjct: 55 EYRKYRERSKERSRDKRERER 75
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 18.6 bits (36), Expect = 9.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 165 NVFYPGQRAFP 133
NV PG+R FP
Sbjct: 11 NVPQPGRRPFP 21
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 18.6 bits (36), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 144 AAQGRRRYDRKQQGYG 191
+ RRR RKQQ G
Sbjct: 1763 SVSSRRRQQRKQQTPG 1778
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 18.6 bits (36), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 144 AAQGRRRYDRKQQGYG 191
+ RRR RKQQ G
Sbjct: 1759 SVSSRRRQQRKQQTPG 1774
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,518
Number of Sequences: 438
Number of extensions: 1201
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3407265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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