Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p10
(702 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 407 e-115
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 395 e-111
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 312 2e-86
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 236 3e-63
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 233 1e-62
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 218 7e-58
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 216 3e-57
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 209 3e-55
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 200 2e-52
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 151 9e-38
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.49
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 28 1.1
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 28 1.5
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 4.5
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 4.5
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 26 4.5
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.0
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 7.9
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 25 7.9
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 25 7.9
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 407 bits (1003), Expect = e-115
Identities = 181/201 (90%), Positives = 190/201 (94%)
Frame = +3
Query: 99 VQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANY 278
VQ+SE E+R LC K+REIF+ QPILLELEAPLKICGDIHGQY DLLRLFEYGGFPPEANY
Sbjct: 27 VQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANY 86
Query: 279 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIK 458
LFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNHECASINRIYGFYDECKRRYNIK
Sbjct: 87 LFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIK 146
Query: 459 LWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWS 638
LWKTFTDCFNCLPIAAIIDEKIF HGGLSPDL M+QI+RIMRPTDVPDTGLLCDLLWS
Sbjct: 147 LWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMRPTDVPDTGLLCDLLWS 206
Query: 639 DPDKDVQGWGENDRGVSFTFG 701
DPDKD+ GWG+NDRGVSFTFG
Sbjct: 207 DPDKDLTGWGDNDRGVSFTFG 227
Score = 32.3 bits (70), Expect = 0.069
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 34 ELNVDSLIHRLLEVRGCRPG 93
++++DS+I RLLEVRG RPG
Sbjct: 5 DVDLDSIIDRLLEVRGSRPG 24
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 395 bits (972), Expect = e-111
Identities = 170/201 (84%), Positives = 190/201 (94%)
Frame = +3
Query: 99 VQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANY 278
VQ+S+AE+R LCT SR IFL QP+LLELEAPLKICGDIHGQY+DLLRLFEYGG+PP+ANY
Sbjct: 24 VQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANY 83
Query: 279 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIK 458
LFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNHE ASINRIYGFYDECKRRY+IK
Sbjct: 84 LFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRYSIK 143
Query: 459 LWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWS 638
LWKTFTDCFNC+P+AA+IDEKIFC HGGLSPDL ++QI+RI+RPTD+PDTGLLCDL+WS
Sbjct: 144 LWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCDLVWS 203
Query: 639 DPDKDVQGWGENDRGVSFTFG 701
DP+KD+ GWGENDRGVS+TFG
Sbjct: 204 DPEKDLTGWGENDRGVSYTFG 224
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 312 bits (767), Expect = 2e-86
Identities = 142/210 (67%), Positives = 163/210 (77%)
Frame = +3
Query: 69 GSSRMQAWHTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFE 248
G SR + +V + AE+ +C REIFL QP LLEL P+KI GD+HGQY+DL+RLFE
Sbjct: 203 GYSRKSS-KSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFE 261
Query: 249 YGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 428
GFPP +NYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNHECA+I R+YGFY
Sbjct: 262 MCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFY 321
Query: 429 DECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPD 608
DECKRR NIK+WKTF + FNCLPIA+++ KIFC HGGLSP L M+ IR I RPTDVPD
Sbjct: 322 DECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDDIREIPRPTDVPD 381
Query: 609 TGLLCDLLWSDPDKDVQGWGENDRGVSFTF 698
GLL DLLWSDP W +N+RGVSF F
Sbjct: 382 YGLLNDLLWSDPADTENDWEDNERGVSFVF 411
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 236 bits (577), Expect = 3e-63
Identities = 101/200 (50%), Positives = 142/200 (71%), Gaps = 1/200 (0%)
Frame = +3
Query: 105 MSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 284
+SEA+V LC K+RE+ Q+ + + P+ +CGDIHGQ+ DL+ LF+ GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 285 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 461
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANV 155
Query: 462 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 641
WK FT+ F+ P+ A+I+++IFC HGGLSP + ++ +R + R +VP G +CDLLWSD
Sbjct: 156 WKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSD 215
Query: 642 PDKDVQGWGENDRGVSFTFG 701
PD D GWG + RG +TFG
Sbjct: 216 PD-DRCGWGISPRGAGYTFG 234
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 233 bits (571), Expect = 1e-62
Identities = 99/200 (49%), Positives = 141/200 (70%), Gaps = 1/200 (0%)
Frame = +3
Query: 105 MSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 284
+SE +V +C ++E+ + + + P+ +CGDIHGQ+ DL+ LF GG P+ NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 285 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 461
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 462 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 641
W+ FTD F+ LP+ A+I+++IFC HGGLSP + ++ +R + R +VP G +CDLLWSD
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSD 202
Query: 642 PDKDVQGWGENDRGVSFTFG 701
PD D GWG + RG +TFG
Sbjct: 203 PD-DRPGWGISPRGAGYTFG 221
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 218 bits (532), Expect = 7e-58
Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
Frame = +3
Query: 111 EAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLG 290
E+ V LC + R+I +++ + + +P+ ICGDIHGQ DLL LF GG P YLFLG
Sbjct: 21 ESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLG 80
Query: 291 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 467
D+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +W+
Sbjct: 81 DFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWR 140
Query: 468 TFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSDPD 647
+ F+ L + A++D K+FC HGGLSP + ++QIR + R +VP G +CDLLWSDP+
Sbjct: 141 YCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSDPE 200
Query: 648 KDVQGWGENDRGVSFTFG 701
D+ GWG + RG F FG
Sbjct: 201 -DISGWGLSPRGAGFLFG 217
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 216 bits (527), Expect = 3e-57
Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Frame = +3
Query: 105 MSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 284
++E+ + LC+ ++E+ +Q+ ++ L P+ + GDIHGQ+ DLL +F GG P NYLF
Sbjct: 17 IAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLF 76
Query: 285 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 461
LGDYVDRG S+ETI LL+ K++YP+ LLRGNHE I + YGFY EC R+Y N +
Sbjct: 77 LGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSECLRKYGNANV 136
Query: 462 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 641
WK FTD F+ L ++A ID+ IFC HGGLSP +Q ++QI + R + P G + DL+WSD
Sbjct: 137 WKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQILVLDRFREFPHEGPMADLVWSD 196
Query: 642 PDKDVQGWGENDRGVSFTFG 701
PD VQ + + RG F+FG
Sbjct: 197 PDPSVQEFSLSPRGAGFSFG 216
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 209 bits (511), Expect = 3e-55
Identities = 90/200 (45%), Positives = 131/200 (65%), Gaps = 1/200 (0%)
Frame = +3
Query: 105 MSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 284
+ E +++ LC + I +++ + + P+ +CGDIHGQ+ DLL LF GG P NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 285 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 461
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANV 136
Query: 462 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 641
WK F+ L +AA+ID KI C HGGLSP+++ ++QIR + R ++P G CDL+WSD
Sbjct: 137 WKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSD 196
Query: 642 PDKDVQGWGENDRGVSFTFG 701
P+ D++ W + RG + FG
Sbjct: 197 PE-DIESWTVSPRGAGWLFG 215
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 200 bits (488), Expect = 2e-52
Identities = 91/184 (49%), Positives = 124/184 (67%)
Frame = +3
Query: 102 QMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYL 281
++SE + + K+ EI + L+E++AP+ +CGDIHGQY DL++LFE GG P YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 282 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 461
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 462 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 641
++ FN LP+AAI++++ C HGGLSP+L + IR I R + P GL+CDLLWSD
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSD 263
Query: 642 PDKD 653
P +D
Sbjct: 264 PLED 267
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 151 bits (366), Expect = 9e-38
Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Frame = +3
Query: 144 REIFLQQPILLEL----EAPLKICGDIHGQYTDLLRLFEYGGFPPEAN-YLFLGDYVDRG 308
+E+ + P L+++ + L ICGD HGQY DLL +F+ G P N YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 309 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 488
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 489 CLPIAAIIDEKIFCCHGGL-SPDLQGMEQIRRIMR--PTDVPDTGLLCDLLWSDPDKDVQ 659
LP+ ++I + HGGL S D ++Q+R I R +GL+ ++LW+DP +
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAP 370
Query: 660 GWGENDRGVSFTFG 701
G G + RGV FG
Sbjct: 371 GRGPSKRGVGLQFG 384
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.5 bits (63), Expect = 0.49
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 477 DCFNCLPIAAIIDEKIFCC-HGGLSPD 554
D ++C+ I A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 631 SKSQSNPVSGTSVGRIILLICSIPCKSGDKPPWQQKIFSSII 506
SK NP+S T++ + C+I S +K P QKI S ++
Sbjct: 106 SKIAFNPISNTTLVLFLTECCNIYLFSENKKPVDQKIRSDLL 147
>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 399
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 321 PVTVYHDLHSHQGISNWLLAEILHIQRDVANLCTD 217
P+T+ + +H HQ +SN E++ Q + L D
Sbjct: 129 PITIRNLIHRHQPLSNITNNELMKYQEEATQLAKD 163
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 354 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 497
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 255 GFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKY 359
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.2 bits (55), Expect = 4.5
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +3
Query: 117 EVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRL------FEYGGFPPEANY 278
+V+ ++ +FL P + +LE L+ G + L RL EY P +
Sbjct: 123 QVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFDA 181
Query: 279 LFLGDYVDRGKQSLETICL 335
L + D V++ + LE ICL
Sbjct: 182 LIVNDDVEKAYKQLEAICL 200
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 4 KFIRVVNMADELNVDSLIHRLLEVR 78
+ + V N D+LN D H+L EVR
Sbjct: 370 RLVDVSNTLDDLNKDMRFHKLSEVR 394
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 515 INYSSNWQAVKAIRESLPQFYIVSAFALVIKTINAVYA 402
+NYS NW VK I E A + K+I AVY+
Sbjct: 1344 VNYSKNWWNVK-ILEHFDFILDTEAASTFPKSITAVYS 1380
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 186 PPTPVIWAAAGIFLWTLCRAHVPLPPTFAQYARPASSNFQKSV 58
PPTP A L C +++PL TF+ + + ++K++
Sbjct: 210 PPTPASTLTAEAALED-CESNLPLTETFSNFEVSLGTRYRKNI 251
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 7.9
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = -2
Query: 515 INYSSNWQAVKAIRESLPQ 459
I+YS++W A++ ++ ++PQ
Sbjct: 123 ISYSAHWLAIEGVQPAIPQ 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,245,586
Number of Sequences: 5004
Number of extensions: 73867
Number of successful extensions: 212
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -