Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p08
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.64 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   2.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   5.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 253 KSGAHTKTCSSSLQRNSNTFILCFTQNDESND 158
           K   H    S S + NSN FIL  T N+ +N+
Sbjct: 447 KINNHEYKRSVSRESNSNQFILMTTVNEGNNN 478


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 303 FLLVLYDLEPMNYWACV*NIFY 368
           F L++YD      W    N+FY
Sbjct: 206 FALLVYDFRNSRSWRITNNLFY 227


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 135 YNIVFEHASFDSSFCVKHRINVLLF 209
           +N V ++ +FD  F ++   NVL F
Sbjct: 3   FNNVIKYINFDRFFFIEGMTNVLDF 27


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -2

Query: 405 KHTKQLSDLQVGDKIYFKHKPNSSWVPG 322
           K    +SD  V  K+ F    NS W  G
Sbjct: 18  KEIHSISDSLVNAKLAFGFLDNSVWADG 45


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 326 GTHELLGLCLKYILSPT 376
           G H++  L  ++ILSPT
Sbjct: 70  GIHQMQQLLQQHILSPT 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,006
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)