Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p03
         (397 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL358472-2|CAI14016.1| 1384|Homo sapiens DENN/MADD domain contai...    33   0.26 
AB007945-1|BAA32321.3| 1626|Homo sapiens KIAA0476 protein protein.     33   0.26 
AY307931-1|AAQ73825.1|  336|Homo sapiens intestinal mucin MUC3B ...    30   2.4  
AY307930-1|AAQ73824.1|  340|Homo sapiens intestinal mucin MUC3A ...    30   2.4  
AK074063-1|BAB84889.1|  341|Homo sapiens FLJ00134 protein protein.     30   2.4  

>AL358472-2|CAI14016.1| 1384|Homo sapiens DENN/MADD domain containing
            4B protein.
          Length = 1384

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 91   GTTRNPFSRKLGQQITVMRHSARCRVRAPDHLRNVPQTCRTVPLDALV 234
            GT R     +L Q +T  RHS   R+  P+   ++P   R  P+D+L+
Sbjct: 939  GTPRRGLGARLQQLLTPSRHSPASRIPPPELPPDLPPPARRSPMDSLL 986


>AB007945-1|BAA32321.3| 1626|Homo sapiens KIAA0476 protein protein.
          Length = 1626

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 91   GTTRNPFSRKLGQQITVMRHSARCRVRAPDHLRNVPQTCRTVPLDALV 234
            GT R     +L Q +T  RHS   R+  P+   ++P   R  P+D+L+
Sbjct: 1181 GTPRRGLGARLQQLLTPSRHSPASRIPPPELPPDLPPPARRSPMDSLL 1228


>AY307931-1|AAQ73825.1|  336|Homo sapiens intestinal mucin MUC3B
           precursor protein.
          Length = 336

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 172 APDHLRNVPQTCRTVPLDALVRQTAFTLQLSAS*PNT-VSKF 294
           AP H  N P T  T P D L+ +T  +  +S++   T  SKF
Sbjct: 67  APGHRENAPMTLTTSPHDTLISETLLSSLVSSNTSTTPTSKF 108


>AY307930-1|AAQ73824.1|  340|Homo sapiens intestinal mucin MUC3A
           precursor protein.
          Length = 340

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 172 APDHLRNVPQTCRTVPLDALVRQTAFTLQLSAS*PNT-VSKF 294
           AP H  N P T  T P D L+ +T     +S++   T  SKF
Sbjct: 67  APGHRENAPMTLTTSPHDTLISETLLNSPVSSNTSTTPTSKF 108


>AK074063-1|BAB84889.1|  341|Homo sapiens FLJ00134 protein protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -3

Query: 176 GALTRQRAECLITVICWPNFLEK--GFLVVPW 87
           G  T  R  C +TV CWP    K  GF + PW
Sbjct: 18  GTRTWPRVSCEVTVQCWPGCHLKVGGFKMAPW 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,684,134
Number of Sequences: 237096
Number of extensions: 1078444
Number of successful extensions: 5339
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5339
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)