Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20p03
         (397 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AJ512486-1|CAD54736.1|  559|Caenorhabditis elegans core alpha-6-...    28   2.1  
AF022968-8|AAN84870.1|  559|Caenorhabditis elegans Fucosyl trans...    28   2.1  
Z81489-4|CAB04010.1|  361|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z74031-6|CAB54239.1|  227|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z74031-5|CAA98457.1|  225|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    27   6.4  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    27   6.4  
Z83109-6|CAB05522.1|  362|Caenorhabditis elegans Hypothetical pr...    27   6.4  
AL132860-30|CAI79280.1|  281|Caenorhabditis elegans Hypothetical...    26   8.5  

>Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 251 LFSCLLHDQTLSRNSKVLYEKKETACYF 334
           LFSC++  + L ++ +V YEK+ + C F
Sbjct: 37  LFSCVVFRKGLHKSLEVAYEKEASGCRF 64


>Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 251 LFSCLLHDQTLSRNSKVLYEKKETACYF 334
           LFSC++  + L ++ +V YEK+ + C F
Sbjct: 37  LFSCVVFRKGLHKSLEVAYEKEASGCRF 64


>AJ512486-1|CAD54736.1|  559|Caenorhabditis elegans core
           alpha-6-fucosyltransferase protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 230 LYDRLRSLFSCLLHDQTLSRNSKVLYE 310
           L DR+R +F  LLH QT+  ++K+L E
Sbjct: 116 LDDRIREMFY-LLHSQTIENSTKILLE 141


>AF022968-8|AAN84870.1|  559|Caenorhabditis elegans Fucosyl
           transferase protein 8 protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 230 LYDRLRSLFSCLLHDQTLSRNSKVLYE 310
           L DR+R +F  LLH QT+  ++K+L E
Sbjct: 116 LDDRIREMFY-LLHSQTIENSTKILLE 141


>Z81489-4|CAB04010.1|  361|Caenorhabditis elegans Hypothetical
           protein C55A1.5 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 13/64 (20%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +2

Query: 203 HAALSLWMRLYDRLRSLFSCL--LHDQTLSRNSKVLYEKKETACYFASIILVVFVFLFNK 376
           + A+ ++ ++ ++L+ + + L  LH Q     + ++     T C FA ++ ++++ +FN 
Sbjct: 230 YCAVVMYQKMEEKLQLVSASLRELHRQFFK--TLIMQILSPTICLFAPVVFIIYLPIFNF 287

Query: 377 DITI 388
           +++I
Sbjct: 288 EVSI 291


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +3

Query: 210 HCPSGCACTTDCVHSS-VVCFMTKHC 284
           HC  GCAC +  + SS   C+  K C
Sbjct: 523 HCGQGCACASGYLRSSDGECYKPKDC 548


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +3

Query: 210 HCPSGCACTTDCVHSS-VVCFMTKHC 284
           HC  GCAC +  + SS   C+  K C
Sbjct: 588 HCGQGCACASGYLRSSDGECYKPKDC 613


>Z74031-6|CAB54239.1|  227|Caenorhabditis elegans Hypothetical
           protein F32D8.5b protein.
          Length = 227

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 337 LYHFSSVRFPIQ*RYNNKKK 396
           L HF + RFPI   YNN KK
Sbjct: 130 LLHFLAKRFPIDIFYNNDKK 149


>Z74031-5|CAA98457.1|  225|Caenorhabditis elegans Hypothetical
           protein F32D8.5a protein.
          Length = 225

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 337 LYHFSSVRFPIQ*RYNNKKK 396
           L HF + RFPI   YNN KK
Sbjct: 128 LLHFLAKRFPIDIFYNNDKK 147


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 201 NMPHCPSGCACTTDCVHSSVVCFMTKHC 284
           N   C SGCAC    V  + VC +   C
Sbjct: 411 NSTTCTSGCACIRGYVRINGVCELMSKC 438


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 201 NMPHCPSGCACTTDCVHSSVVCFMTKHC 284
           N   C SGCAC    V  + VC +   C
Sbjct: 411 NSTTCTSGCACIRGYVRINGVCELMSKC 438


>Z83109-6|CAB05522.1|  362|Caenorhabditis elegans Hypothetical
           protein F44G3.11 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 13/62 (20%), Positives = 32/62 (51%)
 Frame = +2

Query: 203 HAALSLWMRLYDRLRSLFSCLLHDQTLSRNSKVLYEKKETACYFASIILVVFVFLFNKDI 382
           + A  +++++ ++L+ L   + +       + V+     T C F+ +I ++F  LFN +I
Sbjct: 242 YCATIMYLKMEEKLKLLSVSIRNLHRQFYKTLVIQIFTPTICLFSPLIFIIFHPLFNVEI 301

Query: 383 TI 388
            +
Sbjct: 302 VV 303


>AL132860-30|CAI79280.1|  281|Caenorhabditis elegans Hypothetical
           protein Y56A3A.36 protein.
          Length = 281

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 24  LYCSLFLIKIFTFATLVQCQVPWDDEESFFKKIGPTNNCNETF 152
           ++  +  I IF F++LV   +P   E  F   IGP ++ N  +
Sbjct: 37  VFAVVISIAIFAFSSLVNRSIPETFELLFRMVIGPQDSWNRVY 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,972,304
Number of Sequences: 27780
Number of extensions: 174504
Number of successful extensions: 435
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)