Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20p01
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 41 0.001
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 41 0.001
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 41 0.001
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 41 0.001
AY241928-1|AAO85277.1| 806|Caenorhabditis elegans xylosyltransf... 33 0.14
AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide O-xyl... 33 0.14
AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulv... 33 0.14
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 33 0.19
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 33 0.19
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 33 0.19
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 32 0.43
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 32 0.43
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 32 0.43
Z79756-11|CAB02119.2| 614|Caenorhabditis elegans Hypothetical p... 31 0.75
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 31 0.99
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 31 0.99
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 31 0.99
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 31 0.99
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 31 0.99
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 31 0.99
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.7
Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical p... 28 5.3
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Frame = +2
Query: 281 ESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGN----NATSVYDTDVVAPGQPSNLVL 448
ES FC N+ G LDS + T+ GG+ ++ + +T V P P + L
Sbjct: 2178 ESPRFCYNATG-----LDSGQQFKIQVATRIEGGSYGPWSSLVIANTLQVLPDAPRAIHL 2232
Query: 449 FNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLH 625
T+ ++ +RW P + ++T Y R +++ + D N K V++ TL L+
Sbjct: 2233 IEKTDHSLHIRWVPPIDPKGYVTQY--RVSIV-SLDDVNDKKRTHIVNHPTLTYLFEELN 2289
Query: 626 PGSKYNISVAA 658
P + YNIS++A
Sbjct: 2290 PETSYNISISA 2300
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 278 NESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGNNATSVYDTDVVAPGQPSNLVLFNA 457
N + + GNS L ++ + + + T G+ Y T +APGQ L L N
Sbjct: 3515 NYTVPYPGNSIKFEGLRPETIYNITVQAGTNSGYGHILWGTYST--LAPGQRHILRLLNR 3572
Query: 458 TETTVRLRWSAPNAYSFITSYVIRAAVI-ETYSDYNLKPLE-WRVSNETLNMELLNLHPG 631
T TT+ + W S + Y + A + Y + L+ ++ + V + LHP
Sbjct: 3573 TPTTLNVAWEPVWGRSH-SGYTLTARTLYSVYGNVRLQQIKTFDVDASETEFVIRGLHPS 3631
Query: 632 SKYNISVAALNYDE 673
+ YN+++ +++E
Sbjct: 3632 TVYNVTLTPKDHNE 3645
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 407 TDVVAPGQPSNLVLFNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWR 583
T VAPG +NL + +++ W P N IT Y + +I + N +
Sbjct: 1293 TQGVAPGAVANLRVQPIGPDSLQCSWQPPVNPNGRITQYEVTYQLISRGNCDNNQEAPRT 1352
Query: 584 VSNETLNMELLNLHPGSKYNISVAA 658
++ + + LHP SKY + VAA
Sbjct: 1353 ITVNGPHFTITGLHPHSKYRVGVAA 1377
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 359 NETQKCGGNNATSVYDTDVVAP-GQPSNLVLFNATETTVRLRWSAPNAYSFITSYV 523
++ Q+ G + + T AP P+NL L + + VR+ W APN S+ S +
Sbjct: 2404 DQRQRVGVPSPEAQARTGCAAPLSPPTNLNLASPSNVQVRVSWQAPNQNSWKCSAI 2459
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Frame = +2
Query: 281 ESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGN----NATSVYDTDVVAPGQPSNLVL 448
ES FC N+ G LDS + T+ GG+ ++ + +T V P P + L
Sbjct: 2178 ESPRFCYNATG-----LDSGQQFKIQVATRIEGGSYGPWSSLVIANTLQVLPDAPRAIHL 2232
Query: 449 FNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLH 625
T+ ++ +RW P + ++T Y R +++ + D N K V++ TL L+
Sbjct: 2233 IEKTDHSLHIRWVPPIDPKGYVTQY--RVSIV-SLDDVNDKKRTHIVNHPTLTYLFEELN 2289
Query: 626 PGSKYNISVAA 658
P + YNIS++A
Sbjct: 2290 PETSYNISISA 2300
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 278 NESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGNNATSVYDTDVVAPGQPSNLVLFNA 457
N + + GNS L ++ + + + T G+ Y T +APGQ L L N
Sbjct: 3515 NYTVPYPGNSIKFEGLRPETIYNITVQAGTNSGYGHILWGTYST--LAPGQRHILRLLNR 3572
Query: 458 TETTVRLRWSAPNAYSFITSYVIRAAVI-ETYSDYNLKPLE-WRVSNETLNMELLNLHPG 631
T TT+ + W S + Y + A + Y + L+ ++ + V + LHP
Sbjct: 3573 TPTTLNVAWEPVWGRSH-SGYTLTARTLYSVYGNVRLQQIKTFDVDASETEFVIRGLHPS 3631
Query: 632 SKYNISVAALNYDE 673
+ YN+++ +++E
Sbjct: 3632 TVYNVTLTPKDHNE 3645
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 407 TDVVAPGQPSNLVLFNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWR 583
T VAPG +NL + +++ W P N IT Y + +I + N +
Sbjct: 1293 TQGVAPGAVANLRVQPIGPDSLQCSWQPPVNPNGRITQYEVTYQLISRGNCDNNQEAPRT 1352
Query: 584 VSNETLNMELLNLHPGSKYNISVAA 658
++ + + LHP SKY + VAA
Sbjct: 1353 ITVNGPHFTITGLHPHSKYRVGVAA 1377
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 359 NETQKCGGNNATSVYDTDVVAP-GQPSNLVLFNATETTVRLRWSAPNAYSFITSYV 523
++ Q+ G + + T AP P+NL L + + VR+ W APN S+ S +
Sbjct: 2404 DQRQRVGVPSPEAQARTGCAAPLSPPTNLNLASPSNVQVRVSWQAPNQNSWKCSAI 2459
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Frame = +2
Query: 281 ESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGN----NATSVYDTDVVAPGQPSNLVL 448
ES FC N+ G LDS + T+ GG+ ++ + +T V P P + L
Sbjct: 2178 ESPRFCYNATG-----LDSGQQFKIQVATRIEGGSYGPWSSLVIANTLQVLPDAPRAIHL 2232
Query: 449 FNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLH 625
T+ ++ +RW P + ++T Y R +++ + D N K V++ TL L+
Sbjct: 2233 IEKTDHSLHIRWVPPIDPKGYVTQY--RVSIV-SLDDVNDKKRTHIVNHPTLTYLFEELN 2289
Query: 626 PGSKYNISVAA 658
P + YNIS++A
Sbjct: 2290 PETSYNISISA 2300
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 278 NESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGNNATSVYDTDVVAPGQPSNLVLFNA 457
N + + GNS L ++ + + + T G+ Y T +APGQ L L N
Sbjct: 3515 NYTVPYPGNSIKFEGLRPETIYNITVQAGTNSGYGHILWGTYST--LAPGQRHILRLLNR 3572
Query: 458 TETTVRLRWSAPNAYSFITSYVIRAAVI-ETYSDYNLKPLE-WRVSNETLNMELLNLHPG 631
T TT+ + W S + Y + A + Y + L+ ++ + V + LHP
Sbjct: 3573 TPTTLNVAWEPVWGRSH-SGYTLTARTLYSVYGNVRLQQIKTFDVDASETEFVIRGLHPS 3631
Query: 632 SKYNISVAALNYDE 673
+ YN+++ +++E
Sbjct: 3632 TVYNVTLTPKDHNE 3645
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 407 TDVVAPGQPSNLVLFNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWR 583
T VAPG +NL + +++ W P N IT Y + +I + N +
Sbjct: 1293 TQGVAPGAVANLRVQPIGPDSLQCSWQPPVNPNGRITQYEVTYQLISRGNCDNNQEAPRT 1352
Query: 584 VSNETLNMELLNLHPGSKYNISVAA 658
++ + + LHP SKY + VAA
Sbjct: 1353 ITVNGPHFTITGLHPHSKYRVGVAA 1377
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 359 NETQKCGGNNATSVYDTDVVAP-GQPSNLVLFNATETTVRLRWSAPNAYSFITSYV 523
++ Q+ G + + T AP P+NL L + + VR+ W APN S+ S +
Sbjct: 2404 DQRQRVGVPSPEAQARTGCAAPLSPPTNLNLASPSNVQVRVSWQAPNQNSWKCSAI 2459
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Frame = +2
Query: 281 ESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGN----NATSVYDTDVVAPGQPSNLVL 448
ES FC N+ G LDS + T+ GG+ ++ + +T V P P + L
Sbjct: 2178 ESPRFCYNATG-----LDSGQQFKIQVATRIEGGSYGPWSSLVIANTLQVLPDAPRAIHL 2232
Query: 449 FNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLH 625
T+ ++ +RW P + ++T Y R +++ + D N K V++ TL L+
Sbjct: 2233 IEKTDHSLHIRWVPPIDPKGYVTQY--RVSIV-SLDDVNDKKRTHIVNHPTLTYLFEELN 2289
Query: 626 PGSKYNISVAA 658
P + YNIS++A
Sbjct: 2290 PETSYNISISA 2300
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 278 NESTCFCGNSPGKFKLPLDSCHTVCPKNETQKCGGNNATSVYDTDVVAPGQPSNLVLFNA 457
N + + GNS L ++ + + + T G+ Y T +APGQ L L N
Sbjct: 3515 NYTVPYPGNSIKFEGLRPETIYNITVQAGTNSGYGHILWGTYST--LAPGQRHILRLLNR 3572
Query: 458 TETTVRLRWSAPNAYSFITSYVIRAAVI-ETYSDYNLKPLE-WRVSNETLNMELLNLHPG 631
T TT+ + W S + Y + A + Y + L+ ++ + V + LHP
Sbjct: 3573 TPTTLNVAWEPVWGRSH-SGYTLTARTLYSVYGNVRLQQIKTFDVDASETEFVIRGLHPS 3631
Query: 632 SKYNISVAALNYDE 673
+ YN+++ +++E
Sbjct: 3632 TVYNVTLTPKDHNE 3645
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 407 TDVVAPGQPSNLVLFNATETTVRLRWSAP-NAYSFITSYVIRAAVIETYSDYNLKPLEWR 583
T VAPG +NL + +++ W P N IT Y + +I + N +
Sbjct: 1293 TQGVAPGAVANLRVQPIGPDSLQCSWQPPVNPNGRITQYEVTYQLISRGNCDNNQEAPRT 1352
Query: 584 VSNETLNMELLNLHPGSKYNISVAA 658
++ + + LHP SKY + VAA
Sbjct: 1353 ITVNGPHFTITGLHPHSKYRVGVAA 1377
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 359 NETQKCGGNNATSVYDTDVVAP-GQPSNLVLFNATETTVRLRWSAPNAYSFITSYV 523
++ Q+ G + + T AP P+NL L + + VR+ W APN S+ S +
Sbjct: 2404 DQRQRVGVPSPEAQARTGCAAPLSPPTNLNLASPSNVQVRVSWQAPNQNSWKCSAI 2459
>AY241928-1|AAO85277.1| 806|Caenorhabditis elegans
xylosyltransferase protein.
Length = 806
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Frame = +2
Query: 164 IGCYVLKAEEVLNTHTGQSVD------ACLNACEQVHYKYALIGNESTCFCGNSPGKFKL 325
IGC++ K E + T + C C + + Y + CFCGN
Sbjct: 113 IGCFLDKKEARVLTEFEYKLPKSNGKATCRKHCYKAGFLYFGLEFGHECFCGNDVSNATA 172
Query: 326 PLD-SCHTV-CPKNETQK--CGGNNATSVYDT 409
D C CP NE + CGG NA ++ T
Sbjct: 173 VDDVECRAYKCPGNENSEEFCGGFNAVEIFRT 204
>AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide
O-xylosyltransferase protein.
Length = 806
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Frame = +2
Query: 164 IGCYVLKAEEVLNTHTGQSVD------ACLNACEQVHYKYALIGNESTCFCGNSPGKFKL 325
IGC++ K E + T + C C + + Y + CFCGN
Sbjct: 113 IGCFLDKKEARVLTEFEYKLPKSNGKATCRKHCYKAGFLYFGLEFGHECFCGNDVSNATA 172
Query: 326 PLD-SCHTV-CPKNETQK--CGGNNATSVYDT 409
D C CP NE + CGG NA ++ T
Sbjct: 173 VDDVECRAYKCPGNENSEEFCGGFNAVEIFRT 204
>AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulva
protein 6 protein.
Length = 806
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Frame = +2
Query: 164 IGCYVLKAEEVLNTHTGQSVD------ACLNACEQVHYKYALIGNESTCFCGNSPGKFKL 325
IGC++ K E + T + C C + + Y + CFCGN
Sbjct: 113 IGCFLDKKEARVLTEFEYKLPKSNGKATCRKHCYKAGFLYFGLEFGHECFCGNDVSNATA 172
Query: 326 PLD-SCHTV-CPKNETQK--CGGNNATSVYDT 409
D C CP NE + CGG NA ++ T
Sbjct: 173 VDDVECRAYKCPGNENSEEFCGGFNAVEIFRT 204
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 422 PGQPSNLVLFNATETTVRLRWSAPNAYSF--ITSYVIR 529
P P+ ++ N T+T V L W+AP+ IT Y+I+
Sbjct: 531 PSSPTQPIIVNVTDTEVELHWNAPSTSGAGPITGYIIQ 568
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 422 PGQPSNLVLFNATETTVRLRWSAPNAYSF--ITSYVIR 529
P P+ ++ N T+T V L W+AP+ IT Y+I+
Sbjct: 531 PSSPTQPIIVNVTDTEVELHWNAPSTSGAGPITGYIIQ 568
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 422 PGQPSNLVLFNATETTVRLRWSAPNAYSF--ITSYVIR 529
P P+ ++ N T+T V L W+AP+ IT Y+I+
Sbjct: 531 PSSPTQPIIVNVTDTEVELHWNAPSTSGAGPITGYIIQ 568
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.9 bits (69), Expect = 0.43
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = +2
Query: 356 KNETQKCGGNN----ATSVYDTDVVAPGQPSNLVLFNATETTVRLRWSAPNAYSF-ITSY 520
+NE C +N A V PG +L +A T++ +RW P+ + IT+Y
Sbjct: 305 RNEEFTCVSDNIHGSANRTVSIVVTGPGSAPHLKSASAGRTSLTVRWEPPSIINRPITTY 364
Query: 521 VIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLHPGSKYNISVAA 658
+ N K LE V T + + +L P + Y I V A
Sbjct: 365 TLYYTNNPQQPVKNWKKLE--VKEPTREVAIPDLRPDTAYYIRVRA 408
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.43
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = +2
Query: 356 KNETQKCGGNN----ATSVYDTDVVAPGQPSNLVLFNATETTVRLRWSAPNAYSF-ITSY 520
+NE C +N A V PG +L +A T++ +RW P+ + IT+Y
Sbjct: 368 RNEEFTCVSDNIHGSANRTVSIVVTGPGSAPHLKSASAGRTSLTVRWEPPSIINRPITTY 427
Query: 521 VIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLHPGSKYNISVAA 658
+ N K LE V T + + +L P + Y I V A
Sbjct: 428 TLYYTNNPQQPVKNWKKLE--VKEPTREVAIPDLRPDTAYYIRVRA 471
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.43
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = +2
Query: 356 KNETQKCGGNN----ATSVYDTDVVAPGQPSNLVLFNATETTVRLRWSAPNAYSF-ITSY 520
+NE C +N A V PG +L +A T++ +RW P+ + IT+Y
Sbjct: 368 RNEEFTCVSDNIHGSANRTVSIVVTGPGSAPHLKSASAGRTSLTVRWEPPSIINRPITTY 427
Query: 521 VIRAAVIETYSDYNLKPLEWRVSNETLNMELLNLHPGSKYNISVAA 658
+ N K LE V T + + +L P + Y I V A
Sbjct: 428 TLYYTNNPQQPVKNWKKLE--VKEPTREVAIPDLRPDTAYYIRVRA 471
>Z79756-11|CAB02119.2| 614|Caenorhabditis elegans Hypothetical
protein F53C11.6 protein.
Length = 614
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 419 APGQPSNLVLFNATETTVRLRWSAP 493
AP P +L+ +AT +V LRWSAP
Sbjct: 391 APDPPRHLIASHATADSVMLRWSAP 415
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 527 RAAVIETYSDYNLKPL---EWRV---SNETLNMELLNLHPGSKYNISVAALNYDEE 676
RA V TY + KP EW +++ L + + L PG+KY++ VAAL D E
Sbjct: 949 RAPVGNTY-EVQYKPQDADEWETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPE 1003
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 527 RAAVIETYSDYNLKPL---EWRV---SNETLNMELLNLHPGSKYNISVAALNYDEE 676
RA V TY + KP EW +++ L + + L PG+KY++ VAAL D E
Sbjct: 949 RAPVGNTY-EVQYKPQDADEWETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPE 1003
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 527 RAAVIETYSDYNLKPL---EWRV---SNETLNMELLNLHPGSKYNISVAALNYDEE 676
RA V TY + KP EW +++ L + + L PG+KY++ VAAL D E
Sbjct: 1133 RAPVGNTY-EVQYKPQDADEWETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPE 1187
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 527 RAAVIETYSDYNLKPL---EWRV---SNETLNMELLNLHPGSKYNISVAALNYDEE 676
RA V TY + KP EW +++ L + + L PG+KY++ VAAL D E
Sbjct: 1133 RAPVGNTY-EVQYKPQDADEWETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPE 1187
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 527 RAAVIETYSDYNLKPL---EWRV---SNETLNMELLNLHPGSKYNISVAALNYDEE 676
RA V TY + KP EW +++ L + + L PG+KY++ VAAL D E
Sbjct: 949 RAPVGNTY-EVQYKPQDADEWETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPE 1003
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 527 RAAVIETYSDYNLKPL---EWRV---SNETLNMELLNLHPGSKYNISVAALNYDEE 676
RA V TY + KP EW +++ L + + L PG+KY++ VAAL D E
Sbjct: 1133 RAPVGNTY-EVQYKPQDADEWETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPE 1187
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 371 KCGGNN-ATSVYDTD-VVAPGQPSNLVLFNATETTVRLRWSAPNAYSFITSYVIRAAVIE 544
+CG + A + TD APG+P+ + + +VRLRW+AP +R +E
Sbjct: 15773 RCGEDKYAIGIQVTDRPAAPGKPA---VEDQNVDSVRLRWAAPTNDG---GSPVRNYTVE 15826
Query: 545 TYSDYNLKPLEWRVSNETLNMELLNLHPGSKYNISVAALN 664
++ + V+ + + L NL PG Y V A N
Sbjct: 15827 MCTEKGKTWTKAEVTKQAF-ITLFNLVPGESYRFRVRADN 15865
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 371 KCGGNN-ATSVYDTD-VVAPGQPSNLVLFNATETTVRLRWSAPNAYSFITSYVIRAAVIE 544
+CG + A + TD APG+P+ + + +VRLRW+AP +R +E
Sbjct: 15773 RCGEDKYAIGIQVTDRPAAPGKPA---VEDQNVDSVRLRWAAPTNDG---GSPVRNYTVE 15826
Query: 545 TYSDYNLKPLEWRVSNETLNMELLNLHPGSKYNISVAALN 664
++ + V+ + + L NL PG Y V A N
Sbjct: 15827 MCTEKGKTWTKAEVTKQAF-ITLFNLVPGESYRFRVRADN 15865
>Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical
protein F35E12.10 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 374 CGGNNATSVYDTDVVAPGQPSNLVLFNATETTVRLRWSAPNAYS 505
C NN TSV + G S++V+ T+ T+ + PN Y+
Sbjct: 25 CPANNITSVRQNGNIPEGATSSVVIPKGTDCTI--NFDIPNGYA 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,002,552
Number of Sequences: 27780
Number of extensions: 343489
Number of successful extensions: 889
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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