Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o24
         (494 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0084 + 675185-677389                                             28   3.6  
10_08_0206 + 15809261-15809390,15810655-15810763,15811237-158112...    27   8.3  

>06_01_0084 + 675185-677389
          Length = 734

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 204 REKYSKTAGDLQKQRGAQYVPRYQMANTVLARPKAKMSNRHSTGLSTVSGLTFNV*KKTS 383
           +E YS+ A  +++ +   YVP     + V    KA++ N HS  L+   GL       T 
Sbjct: 626 KEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTI 685

Query: 384 QI 389
           QI
Sbjct: 686 QI 687


>10_08_0206 +
           15809261-15809390,15810655-15810763,15811237-15811265,
           15811721-15813048
          Length = 531

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 309 SLSGAPTRCLPFDISEHIERLSVSVNRPLFLSIFP 205
           S  G   RC  F + EHI R   + + P ++SI P
Sbjct: 107 SEGGDNYRCRLFGVPEHISRTDRAEHEPSYISIGP 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,568,632
Number of Sequences: 37544
Number of extensions: 208436
Number of successful extensions: 577
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)