Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o24
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024354-1|ABC86416.1|  885|Drosophila melanogaster IP09037p pro...    29   2.6  
BT022132-1|AAY51527.1|  885|Drosophila melanogaster IP08837p pro...    29   2.6  
AY484701-1|AAR85347.1|  881|Drosophila melanogaster dysfusion pr...    29   2.6  
AE014297-3920|AAF56569.3|  881|Drosophila melanogaster CG32474-P...    29   2.6  
AB095028-1|BAE53416.1|  918|Drosophila melanogaster bHLH-PAS pro...    29   2.6  

>BT024354-1|ABC86416.1|  885|Drosophila melanogaster IP09037p
           protein.
          Length = 885

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 249 LSVSVNRPLFLSIFPDPED-QMVNNHRRPKHVTSDPPDPLSSTT 121
           + +  ++PLF   F +P D   VN+H  P + TS P  P+S ++
Sbjct: 590 IELKEDQPLFC--FQEPVDYSQVNSHVNPPNATSTPNPPISKSS 631


>BT022132-1|AAY51527.1|  885|Drosophila melanogaster IP08837p
           protein.
          Length = 885

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 249 LSVSVNRPLFLSIFPDPED-QMVNNHRRPKHVTSDPPDPLSSTT 121
           + +  ++PLF   F +P D   VN+H  P + TS P  P+S ++
Sbjct: 590 IELKEDQPLFC--FQEPVDYSQVNSHVNPPNATSTPNPPISKSS 631


>AY484701-1|AAR85347.1|  881|Drosophila melanogaster dysfusion
           protein.
          Length = 881

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 249 LSVSVNRPLFLSIFPDPED-QMVNNHRRPKHVTSDPPDPLSSTT 121
           + +  ++PLF   F +P D   VN+H  P + TS P  P+S ++
Sbjct: 590 IELKEDQPLFC--FQEPVDYSQVNSHVNPPNATSTPNPPISKSS 631


>AE014297-3920|AAF56569.3|  881|Drosophila melanogaster CG32474-PA
           protein.
          Length = 881

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 249 LSVSVNRPLFLSIFPDPED-QMVNNHRRPKHVTSDPPDPLSSTT 121
           + +  ++PLF   F +P D   VN+H  P + TS P  P+S ++
Sbjct: 590 IELKEDQPLFC--FQEPVDYSQVNSHVNPPNATSTPNPPISKSS 631


>AB095028-1|BAE53416.1|  918|Drosophila melanogaster bHLH-PAS
           protein similar to humanNXF protein.
          Length = 918

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 249 LSVSVNRPLFLSIFPDPED-QMVNNHRRPKHVTSDPPDPLSSTT 121
           + +  ++PLF   F +P D   VN+H  P + TS P  P+S ++
Sbjct: 626 IELKEDQPLFC--FQEPVDYSQVNSHVNPPNATSTPNPPISKSS 667


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,020,054
Number of Sequences: 53049
Number of extensions: 359973
Number of successful extensions: 931
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)