Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o23
         (400 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014609-1|AAH14609.1|  214|Homo sapiens chromosome 19 open read...    28   9.9  
AY753639-1|AAX09280.1|  214|Homo sapiens c113 sperm protein prot...    28   9.9  

>BC014609-1|AAH14609.1|  214|Homo sapiens chromosome 19 open reading
           frame 36 protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = -2

Query: 360 HVTISNYIGKAASSMKSKIDSF*SFXNSWSERGR*EDCLSHILHCLSCEIIRLVGIYEAX 181
           HV    Y  ++++  KS +    ++ N+W ++      +S  L CL    +  + + +A 
Sbjct: 149 HVACFGYNCESSAQWKSAVQGLLNYINNWHKQDTSMSLVSPALRCLEPPHLANLTLEDAA 208

Query: 180 SCYK 169
            C K
Sbjct: 209 ECLK 212


>AY753639-1|AAX09280.1|  214|Homo sapiens c113 sperm protein
           protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = -2

Query: 360 HVTISNYIGKAASSMKSKIDSF*SFXNSWSERGR*EDCLSHILHCLSCEIIRLVGIYEAX 181
           HV    Y  ++++  KS +    ++ N+W ++      +S  L CL    +  + + +A 
Sbjct: 149 HVACFGYNCESSAQWKSAVQGLLNYINNWHKQDTSMSLVSPALRCLEPPHLANLTLEDAA 208

Query: 180 SCYK 169
            C K
Sbjct: 209 ECLK 212


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,351,545
Number of Sequences: 237096
Number of extensions: 899995
Number of successful extensions: 1195
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)