Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o19
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity ... 97 1e-20
Z34533-4|CAA84299.2| 577|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z30974-2|CAD82916.1| 478|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z30974-1|CAA83225.3| 566|Caenorhabditis elegans Hypothetical pr... 82 3e-16
AY090485-1|AAM11894.1| 566|Caenorhabditis elegans high-affinity... 82 3e-16
Z14092-1|CAA78468.2| 551|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AY090486-1|AAM11895.1| 551|Caenorhabditis elegans high-affinity... 66 2e-11
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 29 3.1
L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 28 5.4
U34902-1|AAA97607.1| 393|Caenorhabditis elegans sma-3 protein. 28 5.4
U00046-9|AAC47050.2| 393|Caenorhabditis elegans Small protein 3... 28 5.4
U00033-8|AAC48294.1| 315|Caenorhabditis elegans Hypothetical pr... 28 5.4
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 28 5.4
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 28 5.4
Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical pr... 28 7.1
U13643-5|AAA21081.1| 89|Caenorhabditis elegans Hypothetical pr... 28 7.1
U13076-1|AAA96984.1| 463|Caenorhabditis elegans steroid hormone... 28 7.1
AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear recep... 28 7.1
AF273770-1|AAG15119.1| 469|Caenorhabditis elegans nuclear recep... 28 7.1
AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear recep... 28 7.1
U23181-1|AAC48209.3| 105|Caenorhabditis elegans Insulin related... 27 9.4
>Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical
protein F31F6.6 protein.
Length = 582
Score = 96.7 bits (230), Expect = 1e-20
Identities = 64/221 (28%), Positives = 101/221 (45%)
Frame = +1
Query: 16 FSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYLYLT 195
FSA IGG T+ GTA+NLV G +P A ++F + F+ PM+ + L
Sbjct: 230 FSANIGGAATITGTASNLVLVGQLNELFPGADTGVNFLSWLIFAFPMVFCCLIYCWCVLY 289
Query: 196 IVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMICFF 375
++Y S +++ + +F E+ V+ F ++ +
Sbjct: 290 LLYLRDAPKGSIIVT-------------RKLQQKYNELHAFSFAEMAVIFCFALLLVLWI 336
Query: 376 CRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLP 555
R PQV PGWG+ + +FV D+ AM + L+F LP L + +
Sbjct: 337 LREPQVVPGWGEMF------KDEFVSDATSAMFIVILLFTLPEKLPSSRGSSEQ------ 384
Query: 556 KSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
+ S +LDW ++ P+S +FLLGGGFAL+ K SGL+
Sbjct: 385 RKASSGLLDWATVQDRFPWSVLFLLGGGFALAAGVKESGLS 425
>AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity
dicarboxylate transporterINDY1 protein.
Length = 582
Score = 96.7 bits (230), Expect = 1e-20
Identities = 64/221 (28%), Positives = 101/221 (45%)
Frame = +1
Query: 16 FSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYLYLT 195
FSA IGG T+ GTA+NLV G +P A ++F + F+ PM+ + L
Sbjct: 230 FSANIGGAATITGTASNLVLVGQLNELFPGADTGVNFLSWLIFAFPMVFCCLIYCWCVLY 289
Query: 196 IVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMICFF 375
++Y S +++ + +F E+ V+ F ++ +
Sbjct: 290 LLYLRDAPKGSIIVT-------------RKLQQKYNELHAFSFAEMAVIFCFALLLVLWI 336
Query: 376 CRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLP 555
R PQV PGWG+ + +FV D+ AM + L+F LP L + +
Sbjct: 337 LREPQVVPGWGEMF------KDEFVSDATSAMFIVILLFTLPEKLPSSRGSSEQ------ 384
Query: 556 KSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
+ S +LDW ++ P+S +FLLGGGFAL+ K SGL+
Sbjct: 385 RKASSGLLDWATVQDRFPWSVLFLLGGGFALAAGVKESGLS 425
>Z34533-4|CAA84299.2| 577|Caenorhabditis elegans Hypothetical
protein B0285.6 protein.
Length = 577
Score = 93.1 bits (221), Expect = 2e-19
Identities = 57/220 (25%), Positives = 103/220 (46%)
Frame = +1
Query: 19 SATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYLYLTI 198
++ IGG GT+ T NL+F+ +P +S+ + AF+IP MI S++ + +
Sbjct: 219 ASLIGGTGTINSTGPNLIFRDNIEKNFPNEDHGISYLSWMAFAIPPMIFYMFSSWFIVQL 278
Query: 199 VYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMICFFC 378
+ G + A+ + ++G +T+ E +++F A++ +
Sbjct: 279 QFLGPRHLMGMFREPTETEKQEEEVAKRAVWKSYDQLGPMTWAEKSTLVIFVLAVLSWVS 338
Query: 379 RSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLPK 558
P+V PGW D +V DS ++ FL+F+ P F+ ++ + P
Sbjct: 339 SDPKVIPGWSDLF------RKGYVTDSCSGLVAVFLLFIWPKKKPDFRIFRKD--KSRPS 390
Query: 559 SRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
R ++DW +R P+S + LLG GFA+S A + SGL+
Sbjct: 391 VRQEPLIDWDCVRRRFPWSIILLLGAGFAISDAVRVSGLS 430
>Z30974-2|CAD82916.1| 478|Caenorhabditis elegans Hypothetical
protein K08E5.2b protein.
Length = 478
Score = 82.2 bits (194), Expect = 3e-16
Identities = 67/221 (30%), Positives = 104/221 (47%)
Frame = +1
Query: 16 FSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYLYLT 195
F+A IGG GT GT +NLV G +P L++ + F+ P+M+L ++T
Sbjct: 141 FAANIGGTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLL--CLFVAWMT 198
Query: 196 IVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMICFF 375
+V F FLR ++ + +T+ E V + F + +
Sbjct: 199 LVSF-FLRD----------APEKDEAVTEMLKTRYNELPRMTYAEKSVFVCFCILLSLWV 247
Query: 376 CRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLP 555
R+P V PG+G F + + D+ AM+V FL+F+LPS + K EDL
Sbjct: 248 FRNPGVVPGFGV-----FFKKGAYT-DATSAMIVAFLLFVLPSERPDLATYIKK--EDLK 299
Query: 556 KSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
K ++DW ++ P+S + LLGGGFAL+ K SGL+
Sbjct: 300 KR--GCLMDWKTMQETFPWSVVLLLGGGFALAAGVKESGLS 338
>Z30974-1|CAA83225.3| 566|Caenorhabditis elegans Hypothetical
protein K08E5.2a protein.
Length = 566
Score = 82.2 bits (194), Expect = 3e-16
Identities = 67/221 (30%), Positives = 104/221 (47%)
Frame = +1
Query: 16 FSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYLYLT 195
F+A IGG GT GT +NLV G +P L++ + F+ P+M+L ++T
Sbjct: 229 FAANIGGTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLL--CLFVAWMT 286
Query: 196 IVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMICFF 375
+V F FLR ++ + +T+ E V + F + +
Sbjct: 287 LVSF-FLRD----------APEKDEAVTEMLKTRYNELPRMTYAEKSVFVCFCILLSLWV 335
Query: 376 CRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLP 555
R+P V PG+G F + + D+ AM+V FL+F+LPS + K EDL
Sbjct: 336 FRNPGVVPGFGV-----FFKKGAYT-DATSAMIVAFLLFVLPSERPDLATYIKK--EDLK 387
Query: 556 KSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
K ++DW ++ P+S + LLGGGFAL+ K SGL+
Sbjct: 388 KR--GCLMDWKTMQETFPWSVVLLLGGGFALAAGVKESGLS 426
>AY090485-1|AAM11894.1| 566|Caenorhabditis elegans high-affinity
plasma membrane transporterINDY2 protein.
Length = 566
Score = 82.2 bits (194), Expect = 3e-16
Identities = 67/221 (30%), Positives = 104/221 (47%)
Frame = +1
Query: 16 FSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYLYLT 195
F+A IGG GT GT +NLV G +P L++ + F+ P+M+L ++T
Sbjct: 229 FAANIGGTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLL--CLFVAWMT 286
Query: 196 IVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMICFF 375
+V F FLR ++ + +T+ E V + F + +
Sbjct: 287 LVSF-FLRD----------APEKDEAVTEMLKTRYNELPRMTYAEKSVFVCFCILLSLWV 335
Query: 376 CRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLP 555
R+P V PG+G F + + D+ AM+V FL+F+LPS + K EDL
Sbjct: 336 FRNPGVVPGFGV-----FFKKGAYT-DATSAMIVAFLLFVLPSERPDLATYIKK--EDLK 387
Query: 556 KSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
K ++DW ++ P+S + LLGGGFAL+ K SGL+
Sbjct: 388 KR--GCLMDWKTMQETFPWSVVLLLGGGFALAAGVKESGLS 426
>Z14092-1|CAA78468.2| 551|Caenorhabditis elegans Hypothetical
protein R107.1 protein.
Length = 551
Score = 66.1 bits (154), Expect = 2e-11
Identities = 50/224 (22%), Positives = 93/224 (41%)
Frame = +1
Query: 7 AATFSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYL 186
A ++ IGG + T NLVF+ YP +++ + F+IP M + ++Y+
Sbjct: 201 ACAHASLIGGTAIITSTGPNLVFRENIHKRYPEGQVTMTYLQWMVFAIPPMFVYLLASYI 260
Query: 187 YLTIVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMI 366
L + G I+ + +G +++ E V + F +
Sbjct: 261 ILVCYFMGPSTFARWFERPSKEEAHLKKLIEKNIQTMYEDLGDVSWGEKSVFVFFILLIG 320
Query: 367 CFFCRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHE 546
+ R P PGWGD + F+ DS +L++ ++F+ P K F
Sbjct: 321 SWISRDPGFTPGWGDLLP-----HRNFISDSVSGVLISCILFVWP---------KDPFD- 365
Query: 547 DLPKSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
P ++ +L W ++++ +S L+G G+A+S SGL+
Sbjct: 366 --PIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLS 407
>AY090486-1|AAM11895.1| 551|Caenorhabditis elegans high-affinity
dicarboxylate transporterINDY3 protein.
Length = 551
Score = 66.1 bits (154), Expect = 2e-11
Identities = 50/224 (22%), Positives = 93/224 (41%)
Frame = +1
Query: 7 AATFSATIGGIGTLVGTATNLVFKGLFMTAYPTAPEYLSFPLFSAFSIPMMILLEASTYL 186
A ++ IGG + T NLVF+ YP +++ + F+IP M + ++Y+
Sbjct: 201 ACAHASLIGGTAIITSTGPNLVFRENIHKRYPEGQVTMTYLQWMVFAIPPMFVYLLASYI 260
Query: 187 YLTIVYFGFLRPNSXXXXXXXXXXXXXXXXRNAIEEDCKRIGTITFWEIMVVLLFGGAMI 366
L + G I+ + +G +++ E V + F +
Sbjct: 261 ILVCYFMGPSTFARWFERPSKEEAHLKKLIEKNIQTMYEDLGDVSWGEKSVFVFFILLIG 320
Query: 367 CFFCRSPQVFPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHE 546
+ R P PGWGD + F+ DS +L++ ++F+ P K F
Sbjct: 321 SWISRDPGFTPGWGDLLP-----HRNFISDSVSGVLISCILFVWP---------KDPFD- 365
Query: 547 DLPKSRVSSVLDWPELRAHMPFSYMFLLGGGFALSMAAKSSGLN 678
P ++ +L W ++++ +S L+G G+A+S SGL+
Sbjct: 366 --PIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLS 407
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 448 VRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLPKSRV 567
VRD L+ LVT L FL P FF W +LPK +V
Sbjct: 192 VRDKLLSPLVTLLPFLRP---YFFSYWYIHDKIELPKRQV 228
>L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical
protein C06E1.7 protein.
Length = 365
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 445 FVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHE---DLPKSRVSSVLDWPELRAHMPFS 615
FV DS +L+T + +LP L FQ ++ H +P S + D P+ ++
Sbjct: 98 FVEDSKYNLLITGVRKVLPGLLDEFQIFEYPVHNKATKVPLSEKCCIFDNPDKFNNISSE 157
Query: 616 YMFLLG 633
Y+ L G
Sbjct: 158 YLHLTG 163
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 PGWGDKIAAHFGVESKFVRDSALAML-VTFLMFLLPSTLTFFQNWKAKFHED 549
P WG+K A+ VE + + + +L V F F+ + W+++FH +
Sbjct: 689 PAWGEK-PANDDVEDQAADEQYMQLLMVVFARFVASKECKYKSIWRSEFHRE 739
>U34902-1|AAA97607.1| 393|Caenorhabditis elegans sma-3 protein.
Length = 393
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 508 LTFFQNWKAKFHEDLPKSRVSSVLDWPELRAHMPFSYM 621
++F + W ED P+ V+S W ELR ++P +Y+
Sbjct: 341 ISFVKGWG----EDYPRQDVTSTPCWLELRLNVPLAYI 374
>U00046-9|AAC47050.2| 393|Caenorhabditis elegans Small protein 3
protein.
Length = 393
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 508 LTFFQNWKAKFHEDLPKSRVSSVLDWPELRAHMPFSYM 621
++F + W ED P+ V+S W ELR ++P +Y+
Sbjct: 341 ISFVKGWG----EDYPRQDVTSTPCWLELRLNVPLAYI 374
>U00033-8|AAC48294.1| 315|Caenorhabditis elegans Hypothetical
protein F37C12.2 protein.
Length = 315
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 394 FPGWGDKIAAHFGVESKFVRDSALAMLVTFLMFLLPSTLTFFQNWKAKFHEDLPK 558
F G+G +A + S +S + L+ F F++ S + NW K+ E++PK
Sbjct: 229 FLGFGTPLALACSISSNMFVNSVIFALL-FPFFIITS---YPANWNRKYEEEIPK 279
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 PGWGDKIAAHFGVESKFVRDSALAML-VTFLMFLLPSTLTFFQNWKAKFHED 549
P WG+K A+ VE + + + +L V F F+ + W+++FH +
Sbjct: 689 PAWGEK-PANDDVEDQAADEQYMQLLMVVFARFVASKECKYKSIWRSEFHRE 739
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 PGWGDKIAAHFGVESKFVRDSALAML-VTFLMFLLPSTLTFFQNWKAKFHED 549
P WG+K A+ VE + + + +L V F F+ + W+++FH +
Sbjct: 689 PAWGEK-PANDDVEDQAADEQYMQLLMVVFARFVASKECKYKSIWRSEFHRE 739
>Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical
protein C48D5.1 protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 CSNYG-KSQGGCKKCYRGRLQENWDYHVLGNHGCAI 347
C +YG ++ GCK ++ +Q+N Y GN C I
Sbjct: 277 CLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPI 312
>U13643-5|AAA21081.1| 89|Caenorhabditis elegans Hypothetical
protein T07E3.2 protein.
Length = 89
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -1
Query: 164 SIIIGIEKAENNGNDKYSGAVGYAVINSPLKT---KLVAVPTKVPIPPIVAEK 15
S+ +GI + D S I SP T + + +PT P PP+VA +
Sbjct: 18 SVYLGIGCKKKKNKDLISTRKNKTPIGSPASTSEHEKIVIPTPPPAPPMVARE 70
>U13076-1|AAA96984.1| 463|Caenorhabditis elegans steroid hormone
receptor familymember CNR8 protein.
Length = 463
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 CSNYG-KSQGGCKKCYRGRLQENWDYHVLGNHGCAI 347
C +YG ++ GCK ++ +Q+N Y GN C I
Sbjct: 121 CLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPI 156
>AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 CSNYG-KSQGGCKKCYRGRLQENWDYHVLGNHGCAI 347
C +YG ++ GCK ++ +Q+N Y GN C I
Sbjct: 277 CLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPI 312
>AF273770-1|AAG15119.1| 469|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 469
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 CSNYG-KSQGGCKKCYRGRLQENWDYHVLGNHGCAI 347
C +YG ++ GCK ++ +Q+N Y GN C I
Sbjct: 127 CLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPI 162
>AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 CSNYG-KSQGGCKKCYRGRLQENWDYHVLGNHGCAI 347
C +YG ++ GCK ++ +Q+N Y GN C I
Sbjct: 277 CLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPI 312
>U23181-1|AAC48209.3| 105|Caenorhabditis elegans Insulin related
protein 5 protein.
Length = 105
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 509 SVDGSRNIRNVTSIARAESRTNLLSTPKCAAILSPHPGNTCGD 381
S D + N + + +I+RA+ TN S CA L PH + CGD
Sbjct: 30 SSDSTGN-QPMDAISRADRHTNYRS---CALRLIPHVWSVCGD 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,053,086
Number of Sequences: 27780
Number of extensions: 336360
Number of successful extensions: 1040
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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