Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o19
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.0  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.7  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   2.7  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    23   2.7  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   6.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.2  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 625 GTCS*TACEPLVLANQVLKKLETLEDPREI 536
           GT   T  +P+   N +LK ++ +E PR I
Sbjct: 561 GTPPFTGGDPMKTYNIILKGIDAIEFPRSI 590


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 145 SIPMMILLEASTYLYLTIVYF 207
           S P MIL EA T   LTI Y+
Sbjct: 284 SDPRMILTEAYTEFNLTIKYY 304


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = +3

Query: 231 CG*GCSNYGKSQGGCKK----CYRGRLQENWD 314
           C   C + GK+ G C+K    C +   ++ WD
Sbjct: 60  CAANCLSLGKAGGHCEKVGCICRKTSFKDLWD 91


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 547 DLPKSRVSSVLDW 585
           DLPK R ++ LDW
Sbjct: 297 DLPKVRYATALDW 309


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = +3

Query: 231 CG*GCSNYGKSQGGCKK----CYRGRLQENWD 314
           C   C + GK+ G C+K    C +   ++ WD
Sbjct: 60  CAANCLSLGKAGGHCEKGVCICRKTSFKDLWD 91


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 327 GNHGCAIIWRCHD 365
           GN  C++ W  HD
Sbjct: 45  GNVSCSVSWEVHD 57


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 155 IGIEKAENNGNDKYSGAVGYAVINSPL 75
           +G E+     +  Y GA   AVI+ P+
Sbjct: 478 LGGERQNGRKDSGYDGAASTAVIHEPV 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,138
Number of Sequences: 438
Number of extensions: 4163
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)