Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o14
(185 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82171-1|CAI95602.1| 757|Homo sapiens activating signal cointeg... 51 6e-07
BC025368-1|AAH25368.1| 757|Homo sapiens activating signal coint... 51 6e-07
AY013289-1|AAG45475.1| 757|Homo sapiens ASC-1 complex subunit P... 51 6e-07
AK223033-1|BAD96753.1| 481|Homo sapiens activating signal coint... 51 6e-07
AK222723-1|BAD96443.1| 481|Homo sapiens activating signal coint... 51 6e-07
AK025241-1|BAB15089.1| 468|Homo sapiens protein ( Homo sapiens ... 51 6e-07
DQ318235-1|ABC54570.1| 263|Homo sapiens R-spondin 1 protein. 31 0.50
DQ165085-1|ABA54598.1| 200|Homo sapiens R-spondin isoform 2 pro... 31 0.50
DQ165084-1|ABA54597.1| 263|Homo sapiens R-spondin isoform 1 pro... 31 0.50
BC114966-1|AAI14967.1| 263|Homo sapiens R-spondin homolog (Xeno... 31 0.50
AL513220-4|CAI15785.1| 236|Homo sapiens R-spondin homolog (Xeno... 31 0.50
AL513220-3|CAM12882.1| 200|Homo sapiens R-spondin homolog (Xeno... 31 0.50
AL513220-2|CAM12883.1| 263|Homo sapiens R-spondin homolog (Xeno... 31 0.50
AK098225-1|BAC05263.1| 236|Homo sapiens protein ( Homo sapiens ... 31 0.50
BC035007-1|AAH35007.1| 594|Homo sapiens family with sequence si... 30 1.5
AL590648-6|CAH72658.1| 594|Homo sapiens family with sequence si... 30 1.5
>Z82171-1|CAI95602.1| 757|Homo sapiens activating signal
cointegrator 1 complex subunit 2 protein.
Length = 757
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VVGKAKGQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLVPS 144
V G +G GQ + R +KE NK++R NH+RR A KR++G++PS
Sbjct: 710 VAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 757
>BC025368-1|AAH25368.1| 757|Homo sapiens activating signal
cointegrator 1 complex subunit 2 protein.
Length = 757
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VVGKAKGQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLVPS 144
V G +G GQ + R +KE NK++R NH+RR A KR++G++PS
Sbjct: 710 VAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 757
>AY013289-1|AAG45475.1| 757|Homo sapiens ASC-1 complex subunit P100
protein.
Length = 757
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VVGKAKGQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLVPS 144
V G +G GQ + R +KE NK++R NH+RR A KR++G++PS
Sbjct: 710 VAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 757
>AK223033-1|BAD96753.1| 481|Homo sapiens activating signal
cointegrator 1 complex subunit 2 variant protein.
Length = 481
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VVGKAKGQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLVPS 144
V G +G GQ + R +KE NK++R NH+RR A KR++G++PS
Sbjct: 434 VAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 481
>AK222723-1|BAD96443.1| 481|Homo sapiens activating signal
cointegrator 1 complex subunit 2 variant protein.
Length = 481
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VVGKAKGQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLVPS 144
V G +G GQ + R +KE NK++R NH+RR A KR++G++PS
Sbjct: 434 VAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 481
>AK025241-1|BAB15089.1| 468|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21588 fis, clone COL06949. ).
Length = 468
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 1 VVGKAKGQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLVPS 144
V G +G GQ + R +KE NK++R NH+RR A KR++G++PS
Sbjct: 421 VAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS 468
>DQ318235-1|ABC54570.1| 263|Homo sapiens R-spondin 1 protein.
Length = 263
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 216 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 254
>DQ165085-1|ABA54598.1| 200|Homo sapiens R-spondin isoform 2
protein.
Length = 200
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 153 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 191
>DQ165084-1|ABA54597.1| 263|Homo sapiens R-spondin isoform 1
protein.
Length = 263
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 216 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 254
>BC114966-1|AAI14967.1| 263|Homo sapiens R-spondin homolog (Xenopus
laevis) protein.
Length = 263
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 216 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 254
>AL513220-4|CAI15785.1| 236|Homo sapiens R-spondin homolog (Xenopus
laevis) protein.
Length = 236
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 189 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 227
>AL513220-3|CAM12882.1| 200|Homo sapiens R-spondin homolog (Xenopus
laevis) protein.
Length = 200
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 153 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 191
>AL513220-2|CAM12883.1| 263|Homo sapiens R-spondin homolog (Xenopus
laevis) protein.
Length = 263
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 216 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 254
>AK098225-1|BAC05263.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ40906 fis, clone UTERU2004698, highly similar to
Mus musculus mRNA for thrombospondin type 1 domain. ).
Length = 236
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GQGQEKNVLVNRERKEKNKSSRGNHSRRQGAQWKRTQGLV 138
GQG+ +N N RKE ++ G+ RR+G Q ++ QG V
Sbjct: 189 GQGRRENANRNLARKESKEAGAGSR-RRKGQQQQQQQGTV 227
>BC035007-1|AAH35007.1| 594|Homo sapiens family with sequence
similarity 71, member A protein.
Length = 594
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 7 GKAKGQGQEKNVLVNRERKEKNKS-SRGNHSRRQGAQWKRTQG 132
G+ + Q + RER+EK+++ R +H RR G +T+G
Sbjct: 409 GRERTQASAEGCKEGRERREKDRALGRSSHRRRTGESRHKTRG 451
>AL590648-6|CAH72658.1| 594|Homo sapiens family with sequence
similarity 71, member A protein.
Length = 594
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 7 GKAKGQGQEKNVLVNRERKEKNKS-SRGNHSRRQGAQWKRTQG 132
G+ + Q + RER+EK+++ R +H RR G +T+G
Sbjct: 409 GRERTQASAEGCKEGRERREKDRALGRSSHRRRTGESRHKTRG 451
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,013,898
Number of Sequences: 237096
Number of extensions: 210565
Number of successful extensions: 885
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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