Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o13
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665... 53 2e-07
12_02_0645 + 21475126-21475293,21475386-21475538,21478101-214782... 40 0.001
03_05_1063 + 30048724-30048753,30049036-30049175,30049282-300493... 40 0.002
01_06_1393 - 36999631-36999723,37000244-37000393,37000413-370005... 33 0.16
10_08_0290 + 16549048-16549262,16549770-16549833,16550106-165502... 32 0.49
08_02_0295 - 15449323-15449376,15449625-15449804,15450558-154506... 31 0.65
03_01_0632 - 4647271-4648704 30 2.0
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 29 2.6
01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490... 29 3.5
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 29 4.6
03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542 28 6.1
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 28 8.0
>01_06_0903 +
32862551-32864752,32865341-32865535,32866219-32866523,
32866664-32866849,32867137-32867314,32867548-32867574
Length = 1030
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/139 (25%), Positives = 72/139 (51%)
Frame = +1
Query: 148 DELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLN 327
+ELF++ I EI + + EI + EELR +VG YRDL+ +AD+I ++ ++ +
Sbjct: 15 EELFRTRRIPEIRAAEGATRREISAKEEELRQLVGRSYRDLLDSADSILLIKQSSDAVSG 74
Query: 328 HISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTCI 507
++S + + +L P + S + +L++ + + K L++ PE IW +
Sbjct: 75 NLSRISDSLASLAPPP------EAPPAASPSPSGGRVRLYASAARAKYLVDTPEHIWGRL 128
Query: 508 ETEDFVKATQLFIFARHVN 564
+ ++A ++ A+ V+
Sbjct: 129 DEGLLLEAAGRYVRAQVVH 147
>12_02_0645 +
21475126-21475293,21475386-21475538,21478101-21478249,
21478449-21478526,21478604-21478697,21478920-21478994,
21479341-21479637,21479722-21479789,21479876-21479930,
21480137-21480275,21480439-21480623,21480748-21481119
Length = 610
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/134 (23%), Positives = 62/134 (46%)
Frame = +1
Query: 163 SHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEM 342
S SI + + + L+ + ER R +++ + E Y I A++ + +R H+ +
Sbjct: 48 SFSIERLHKEPELLRVDAERVRRQMQEVAVENYGAFIAASEALSFVRAQLEGFDRHLEAL 107
Query: 343 MKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTCIETEDF 522
++ NL + F + +A + +N L + S L +L EIP+ + TCI ++
Sbjct: 108 IEEIPNL-TSGCTEF-VESAQQILEERKLNQTLLANHSTLLDLL-EIPQLMDTCIRNGNY 164
Query: 523 VKATQLFIFARHVN 564
+A L F ++
Sbjct: 165 DEALDLEAFVSKIS 178
>03_05_1063 +
30048724-30048753,30049036-30049175,30049282-30049336,
30049419-30049526,30050190-30050288,30050380-30050457,
30050558-30050635,30051875-30051949,30052117-30052217,
30052502-30052527,30053224-30053297,30053358-30053379,
30054108-30054223,30054361-30054618,30054716-30054832,
30055649-30055699,30055859-30056086,30056550-30056648,
30056823-30056999,30057298-30057417
Length = 683
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/137 (20%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Frame = +1
Query: 160 QSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISE 339
Q ++ + Q K+ EI+ +L+ +V E Y I A DTI+ M+ ++ +
Sbjct: 12 QQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIVGMEANMEQ 71
Query: 340 MMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLH---SLSVQLKILMEIPEKIWTCIE 510
++ ++ + + T N +LH +L +++ + ++P ++ CI+
Sbjct: 72 LLSKITSVQS------RSDTVNTSLFDKRENIEKLHRTRNLLRKVQFIYDLPTRLNKCIK 125
Query: 511 TEDFVKATQLFIFARHV 561
TE + A + F A+ +
Sbjct: 126 TEAYADAVRFFTGAKPI 142
>01_06_1393 -
36999631-36999723,37000244-37000393,37000413-37000500,
37001362-37001465,37003115-37003192,37004247-37004369,
37004508-37004615
Length = 247
Score = 33.5 bits (73), Expect = 0.16
Identities = 30/135 (22%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Frame = +1
Query: 151 ELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNH 330
EL ++H E+D+ + ++ E ER ++ R ++ E + A DT+ + T + L H
Sbjct: 95 ELIETHQ-KEVDKALQSMEEEAERVFQDERLLLRED--EAASARDTMFEQSETVENELQH 151
Query: 331 ISEMMKA-CQNLHNTHLVG---FKISNAPTPTQSYNV-NSNQLHSLSVQLKIL-MEIPEK 492
++E +K+ Q L+ T + + + P P Q ++ + V ++IL ++
Sbjct: 152 MTEQVKSIIQTLNATQYLSSDDLCLRHQPPPIQGAEFETADSMTPFDVAVRILDNQLRSL 211
Query: 493 IWTCIETEDFVKATQ 537
+W + +F Q
Sbjct: 212 MWIDEKANEFSSRIQ 226
>10_08_0290 +
16549048-16549262,16549770-16549833,16550106-16550267,
16550786-16550956,16551041-16551235,16551421-16551546,
16551648-16551809,16551953-16552120,16552223-16552435
Length = 491
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/90 (18%), Positives = 50/90 (55%)
Frame = +1
Query: 109 VKMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADT 288
++ ++SN LE + D+L + +++ + ++Q+KL+++ +++ ++ + ++ D I A
Sbjct: 340 IEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVA 399
Query: 289 IEDMRVTTASTLNHISEMMKACQNLHNTHL 378
+++ VT ++ + M + L + L
Sbjct: 400 LQN-EVTDKLSILGLMPMSSLAEQLKDKAL 428
>08_02_0295 -
15449323-15449376,15449625-15449804,15450558-15450604,
15450695-15450875,15451348-15451452,15452414-15452473,
15452957-15453041,15453337-15453353
Length = 242
Score = 31.5 bits (68), Expect = 0.65
Identities = 27/121 (22%), Positives = 50/121 (41%)
Frame = +1
Query: 112 KMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTI 291
K + + L +V EL + + + YE+ + E LR G+ ++
Sbjct: 6 KTNYTKLTTLVLKELKRVATTQPASSSEITTIYEVVQNSENLRMSKGQMVHEIHSKNSWN 65
Query: 292 EDMRVTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKI 471
++MR++T ST + +K C + L+G + N V S+ LH + L +
Sbjct: 66 KEMRLSTYSTA--LDSTLKTCSRFISLWLIGNNLHN--LELWRLEVASHDLHVVKYLLDL 121
Query: 472 L 474
L
Sbjct: 122 L 122
>03_01_0632 - 4647271-4648704
Length = 477
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 187 QVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEMMK-ACQNL 363
+V K+ E L+ M+G++ + +E +RVT A+ + + E+
Sbjct: 302 KVVKEALEEARGENAALKEMLGDKDTAIKCTKQELECLRVTEAAARDSVKELQSLLVATS 361
Query: 364 HNTHLVGFKISNAPTPTQS 420
+ G K+S +P+PT S
Sbjct: 362 SSPTAAGMKLSASPSPTAS 380
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 184 DQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEMMKACQNL 363
D +Q++LQ + +REEL+ + E +I IE R A+ H++ K + L
Sbjct: 61 DIIQQRLQ-SVVHQREELQRLEMELRAQVIAHPQIIEAQRSFEAAAKEHVTAAAKLKEQL 119
Query: 364 H 366
H
Sbjct: 120 H 120
>01_06_0717 -
31446860-31447074,31447183-31447270,31448909-31449012,
31449618-31449745,31450461-31450555,31461823-31463115,
31463188-31464039,31464568-31464621
Length = 942
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 145 PDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDL 270
PD + + N ++ ++K+Q + +RRREE+ + ER ++
Sbjct: 868 PDLKAEKDASNAAEKAERKMQLKEKRRREEMERLEKERRAEI 909
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +1
Query: 130 LLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIE--DMR 303
LL+I+ +LFQSH + + ++ E E+R E ++A + D++ + +
Sbjct: 2185 LLDIIEKDLFQSH-MRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLN 2243
Query: 304 VTTASTL---NHISEMMKACQNLHNTHLVG 384
+T+A TL H MK Q + H +G
Sbjct: 2244 LTSADTLVFMEHDWNPMKDLQAMDRAHRLG 2273
>03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542
Length = 138
Score = 28.3 bits (60), Expect = 6.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 614 CTPGCDFCPPICSC 573
C PGC+ C P C C
Sbjct: 102 CCPGCNSCRPACQC 115
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 229 EELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEMMKA 351
+++ A + E + H A T D+RV +TLN + +KA
Sbjct: 188 KDIGAYLSEYVHYIAHGATTDSDVRVLALNTLNALKRSVKA 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,080,628
Number of Sequences: 37544
Number of extensions: 303977
Number of successful extensions: 820
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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