Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o13
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047465-1|AAH47465.1| 940|Homo sapiens COG1 protein protein. 119 1e-26
BC021985-1|AAH21985.1| 980|Homo sapiens component of oligomeric... 119 1e-26
AB037802-1|BAA92619.1| 961|Homo sapiens KIAA1381 protein protein. 119 1e-26
BC067263-1|AAH67263.1| 974|Homo sapiens exocyst complex compone... 35 0.31
BC026174-1|AAH26174.1| 474|Homo sapiens EXOC4 protein protein. 35 0.31
AL831989-1|CAD89977.1| 974|Homo sapiens hypothetical protein pr... 35 0.31
AK027688-1|BAB55298.1| 974|Homo sapiens protein ( Homo sapiens ... 35 0.31
AF380839-1|AAK57456.1| 974|Homo sapiens secretory protein SEC8 ... 35 0.31
AB051486-1|BAB21790.1| 966|Homo sapiens KIAA1699 protein protein. 35 0.31
BC017438-1|AAH17438.1| 782|Homo sapiens chromosome 11 open read... 33 0.96
BC010540-1|AAH10540.1| 782|Homo sapiens chromosome 11 open read... 33 0.96
BC007198-1|AAH07198.1| 782|Homo sapiens chromosome 11 open read... 33 0.96
AF024631-1|AAF21627.2| 782|Homo sapiens ANG2 protein. 33 0.96
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 32 2.2
BC052297-1|AAH52297.1| 144|Homo sapiens Similar to RIKEN cDNA 2... 32 2.2
BC006555-1|AAH06555.2| 709|Homo sapiens C11orf2 protein protein. 31 2.9
BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein pr... 31 3.9
AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein. 31 5.1
AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated prot... 31 5.1
M74547-1|AAA36397.1| 935|Homo sapiens p107 protein. 30 8.9
L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein. 30 8.9
BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1 (... 30 8.9
AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1 (... 30 8.9
AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1 (... 30 8.9
AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1 (... 30 8.9
AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1 (... 30 8.9
AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1 (... 30 8.9
AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1 (... 30 8.9
>BC047465-1|AAH47465.1| 940|Homo sapiens COG1 protein protein.
Length = 940
Score = 119 bits (286), Expect = 1e-26
Identities = 63/182 (34%), Positives = 101/182 (55%)
Frame = +1
Query: 145 PDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTL 324
P LF++H EI ++++++ EIE ++EELR MVGERYRDLI AADTI MR +
Sbjct: 18 PAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAVGLV 77
Query: 325 NHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTC 504
+ + + C L G P Q + + +S++ Q+K+L+EIPEKIW+
Sbjct: 78 DAVKATDQYCARLRQ---AGSAAPRPPRAQQPQQPSQEKFYSMAAQIKLLLEIPEKIWSS 134
Query: 505 IETEDFVKATQLFIFARHVNTGLQLQIGGQKSQPGVQSFHRMVQQQWNSISNFNQTIIRV 684
+E + ATQL++ H+++ LQL + P + F +++Q + S+F TI+
Sbjct: 135 MEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQV-AAASHFRSTILHE 193
Query: 685 CK 690
K
Sbjct: 194 SK 195
>BC021985-1|AAH21985.1| 980|Homo sapiens component of oligomeric
golgi complex 1 protein.
Length = 980
Score = 119 bits (286), Expect = 1e-26
Identities = 63/182 (34%), Positives = 101/182 (55%)
Frame = +1
Query: 145 PDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTL 324
P LF++H EI ++++++ EIE ++EELR MVGERYRDLI AADTI MR +
Sbjct: 18 PAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAVGLV 77
Query: 325 NHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTC 504
+ + + C L G P Q + + +S++ Q+K+L+EIPEKIW+
Sbjct: 78 DAVKATDQYCARLRQ---AGSAAPRPPRAQQPQQPSQEKFYSMAAQIKLLLEIPEKIWSS 134
Query: 505 IETEDFVKATQLFIFARHVNTGLQLQIGGQKSQPGVQSFHRMVQQQWNSISNFNQTIIRV 684
+E + ATQL++ H+++ LQL + P + F +++Q + S+F TI+
Sbjct: 135 MEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQV-AAASHFRSTILHE 193
Query: 685 CK 690
K
Sbjct: 194 SK 195
>AB037802-1|BAA92619.1| 961|Homo sapiens KIAA1381 protein protein.
Length = 961
Score = 119 bits (286), Expect = 1e-26
Identities = 63/182 (34%), Positives = 101/182 (55%)
Frame = +1
Query: 145 PDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTL 324
P LF++H EI ++++++ EIE ++EELR MVGERYRDLI AADTI MR +
Sbjct: 17 PAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAVGLV 76
Query: 325 NHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTC 504
+ + + C L G P Q + + +S++ Q+K+L+EIPEKIW+
Sbjct: 77 DAVKATDQYCARLRQ---AGSAAPRPPRAQQPQQPSQEKFYSMAAQIKLLLEIPEKIWSS 133
Query: 505 IETEDFVKATQLFIFARHVNTGLQLQIGGQKSQPGVQSFHRMVQQQWNSISNFNQTIIRV 684
+E + ATQL++ H+++ LQL + P + F +++Q + S+F TI+
Sbjct: 134 MEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQV-AAASHFRSTILHE 192
Query: 685 CK 690
K
Sbjct: 193 SK 194
>BC067263-1|AAH67263.1| 974|Homo sapiens exocyst complex component
4 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.31
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +1
Query: 124 SNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMR 303
S LL V L S + + + + +L+ E+ +L ++ + Y +L A T + +
Sbjct: 21 SGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 80
Query: 304 VTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEI 483
++ N I ++ +NL + ++ + + + +L +++ + ++
Sbjct: 81 ERITNSRNKIKQVK---ENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQV 137
Query: 484 PEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGG 591
P+K+ C+ ++ ++ AT + + A G LQ+ G
Sbjct: 138 PQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEG 173
>BC026174-1|AAH26174.1| 474|Homo sapiens EXOC4 protein protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.31
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +1
Query: 124 SNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMR 303
S LL V L S + + + + +L+ E+ +L ++ + Y +L A T + +
Sbjct: 21 SGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 80
Query: 304 VTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEI 483
++ N I ++ +NL + ++ + + + +L +++ + ++
Sbjct: 81 ERITNSRNKIKQVK---ENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQV 137
Query: 484 PEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGG 591
P+K+ C+ ++ ++ AT + + A G LQ+ G
Sbjct: 138 PQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEG 173
>AL831989-1|CAD89977.1| 974|Homo sapiens hypothetical protein
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.31
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +1
Query: 124 SNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMR 303
S LL V L S + + + + +L+ E+ +L ++ + Y +L A T + +
Sbjct: 21 SGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 80
Query: 304 VTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEI 483
++ N I ++ +NL + ++ + + + +L +++ + ++
Sbjct: 81 ERITNSRNKIKQVK---ENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQV 137
Query: 484 PEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGG 591
P+K+ C+ ++ ++ AT + + A G LQ+ G
Sbjct: 138 PQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEG 173
>AK027688-1|BAB55298.1| 974|Homo sapiens protein ( Homo sapiens
cDNA FLJ14782 fis, clone NT2RP4000524, highly similar to
Mus musculus Sec8 mRNA. ).
Length = 974
Score = 34.7 bits (76), Expect = 0.31
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +1
Query: 124 SNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMR 303
S LL V L S + + + + +L+ E+ +L ++ + Y +L A T + +
Sbjct: 21 SGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 80
Query: 304 VTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEI 483
++ N I ++ +NL + ++ + + + +L +++ + ++
Sbjct: 81 ERITNSRNKIKQVK---ENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQV 137
Query: 484 PEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGG 591
P+K+ C+ ++ ++ AT + + A G LQ+ G
Sbjct: 138 PQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEG 173
>AF380839-1|AAK57456.1| 974|Homo sapiens secretory protein SEC8
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.31
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +1
Query: 124 SNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMR 303
S LL V L S + + + + +L+ E+ +L ++ + Y +L A T + +
Sbjct: 21 SGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 80
Query: 304 VTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEI 483
++ N I ++ +NL + ++ + + + +L +++ + ++
Sbjct: 81 ERITNSRNKIKQVK---ENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQV 137
Query: 484 PEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGG 591
P+K+ C+ ++ ++ AT + + A G LQ+ G
Sbjct: 138 PQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEG 173
>AB051486-1|BAB21790.1| 966|Homo sapiens KIAA1699 protein protein.
Length = 966
Score = 34.7 bits (76), Expect = 0.31
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +1
Query: 124 SNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMR 303
S LL V L S + + + + +L+ E+ +L ++ + Y +L A T + +
Sbjct: 13 SGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSIT 72
Query: 304 VTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEI 483
++ N I ++ +NL + ++ + + + +L +++ + ++
Sbjct: 73 ERITNSRNKIKQVK---ENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQV 129
Query: 484 PEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGG 591
P+K+ C+ ++ ++ AT + + A G LQ+ G
Sbjct: 130 PQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEG 165
>BC017438-1|AAH17438.1| 782|Homo sapiens chromosome 11 open reading
frame2 protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.96
Identities = 27/134 (20%), Positives = 56/134 (41%)
Frame = +1
Query: 136 EIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTA 315
E+ D+L + + ++ + + +I +++ +V E Y I A DTI M+
Sbjct: 71 EVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFR 130
Query: 316 STLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKI 495
+ EM + N+ +IS +H+L +L+ L E+P ++
Sbjct: 131 KMED---EMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLFELPSRL 187
Query: 496 WTCIETEDFVKATQ 537
C+E + +A +
Sbjct: 188 TKCVELGAYGQAVR 201
>BC010540-1|AAH10540.1| 782|Homo sapiens chromosome 11 open reading
frame2 protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.96
Identities = 27/134 (20%), Positives = 56/134 (41%)
Frame = +1
Query: 136 EIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTA 315
E+ D+L + + ++ + + +I +++ +V E Y I A DTI M+
Sbjct: 71 EVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFR 130
Query: 316 STLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKI 495
+ EM + N+ +IS +H+L +L+ L E+P ++
Sbjct: 131 KMED---EMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLFELPSRL 187
Query: 496 WTCIETEDFVKATQ 537
C+E + +A +
Sbjct: 188 TKCVELGAYGQAVR 201
>BC007198-1|AAH07198.1| 782|Homo sapiens chromosome 11 open reading
frame2 protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.96
Identities = 27/134 (20%), Positives = 56/134 (41%)
Frame = +1
Query: 136 EIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTA 315
E+ D+L + + ++ + + +I +++ +V E Y I A DTI M+
Sbjct: 71 EVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFR 130
Query: 316 STLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKI 495
+ EM + N+ +IS +H+L +L+ L E+P ++
Sbjct: 131 KMED---EMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLFELPSRL 187
Query: 496 WTCIETEDFVKATQ 537
C+E + +A +
Sbjct: 188 TKCVELGAYGQAVR 201
>AF024631-1|AAF21627.2| 782|Homo sapiens ANG2 protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.96
Identities = 27/134 (20%), Positives = 56/134 (41%)
Frame = +1
Query: 136 EIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTA 315
E+ D+L + + ++ + + +I +++ +V E Y I A DTI M+
Sbjct: 71 EVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFR 130
Query: 316 STLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKI 495
+ EM + N+ +IS +H+L +L+ L E+P ++
Sbjct: 131 KMED---EMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLFELPSRL 187
Query: 496 WTCIETEDFVKATQ 537
C+E + +A +
Sbjct: 188 TKCVELGAYGQAVR 201
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 614 CTPGCDFCPPICSCKPVLTCL 552
C P C C P+C CKPV C+
Sbjct: 31 CGPSC--CAPVCCCKPVCCCV 49
>BC052297-1|AAH52297.1| 144|Homo sapiens Similar to RIKEN cDNA
2310002J15 gene protein.
Length = 144
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 656 DIEFHCCCTIL*NDCTPGCDFCPPICSCKPVLTCL 552
DI HCCC C C CPP C C C+
Sbjct: 113 DIAHHCCCC----PCCHCCH-CPPFCRCHSCCCCV 142
>BC006555-1|AAH06555.2| 709|Homo sapiens C11orf2 protein protein.
Length = 709
Score = 31.5 bits (68), Expect = 2.9
Identities = 26/130 (20%), Positives = 54/130 (41%)
Frame = +1
Query: 148 DELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLN 327
D+L + + ++ + + +I +++ +V E Y I A DTI M+ +
Sbjct: 2 DKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFRKMED 61
Query: 328 HISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTCI 507
EM + N+ +IS +H+L +L+ L E+P ++ C+
Sbjct: 62 ---EMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLFELPSRLTKCV 118
Query: 508 ETEDFVKATQ 537
E + +A +
Sbjct: 119 ELGAYGQAVR 128
>BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein
protein.
Length = 1763
Score = 31.1 bits (67), Expect = 3.9
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 160 QSHSINE-IDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHIS 336
++H + I ++ ++L +++++RE L + E +R+ TI D+R N ++
Sbjct: 393 ENHRLRRSIKKITQELS-DLQQKRERLEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVN 451
Query: 337 EMMKACQNLHNTHL 378
E KA +N + + L
Sbjct: 452 EREKAMENRYKSLL 465
>AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein.
Length = 238
Score = 30.7 bits (66), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 614 CTPGCDFCPPICSCKPVLTCL 552
C GC C P+C CKPV C+
Sbjct: 31 CGSGC--CVPVCCCKPVCCCV 49
>AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated protein
protein.
Length = 238
Score = 30.7 bits (66), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 614 CTPGCDFCPPICSCKPVLTCL 552
C GC C P+C CKPV C+
Sbjct: 31 CGSGC--CVPVCCCKPVCCCV 49
>M74547-1|AAA36397.1| 935|Homo sapiens p107 protein.
Length = 935
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 663 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 692
>L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein.
Length = 1068
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
>AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 421 YNVNSNQLHSLSVQLKILMEIPEKIWTCIE 510
Y++ S +L L ++L + E+ KIWTC E
Sbjct: 796 YHLASVRLRDLCLKLDVSNELRRKIWTCFE 825
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,228,771
Number of Sequences: 237096
Number of extensions: 1801313
Number of successful extensions: 3966
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3957
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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