Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o13
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 50 2e-06
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 50 2e-06
Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 31 0.59
AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family h... 31 0.59
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z74031-3|CAA98455.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 29 2.4
L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 29 3.1
AL032646-1|CAA21676.1| 385|Caenorhabditis elegans Hypothetical ... 29 3.1
AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical ... 29 3.1
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 29 3.1
AC103567-5|AAL35728.2| 337|Caenorhabditis elegans Hypothetical ... 29 3.1
M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 28 5.5
U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 28 7.2
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 27 9.6
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 27 9.6
Z70213-2|CAA94171.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical... 27 9.6
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 27 9.6
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +1
Query: 148 DELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLN 327
D L + S+ +++ +Q+ L+ E+E +RE LR MVG RYRD++ A+ + + +
Sbjct: 4 DRLMRDLSVEQLENIQQNLEKEMEGKRESLREMVGRRYRDVLEASSEVRHVCSLADKLAS 63
Query: 328 HISEMMKACQNLH 366
I+ Q+ H
Sbjct: 64 DIANTRVGYQSTH 76
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +1
Query: 148 DELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLN 327
D L + S+ +++ +Q+ L+ E+E +RE LR MVG RYRD++ A+ + + +
Sbjct: 4 DRLMRDLSVEQLENIQQNLEKEMEGKRESLREMVGRRYRDVLEASSEVRHVCSLADKLAS 63
Query: 328 HISEMMKACQNLH 366
I+ Q+ H
Sbjct: 64 DIANTRVGYQSTH 76
>Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 145 PDELFQSHSINEIDQVQKKLQYEIERRREELRAMVG 252
P LF H +NE+++ KK +Y REEL +G
Sbjct: 138 PRVLFTQHQVNELEERFKKQRYVTATEREELAQCLG 173
>AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family
homeodomain proteinCEH-28 protein.
Length = 201
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 145 PDELFQSHSINEIDQVQKKLQYEIERRREELRAMVG 252
P LF H +NE+++ KK +Y REEL +G
Sbjct: 107 PRVLFTQHQVNELEERFKKQRYVTATEREELAQCLG 142
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +1
Query: 178 EIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEMMKACQ 357
EI Q+ + L+Y +E + LR + +RY L D I + + A L H +E++K +
Sbjct: 178 EIKQLDEDLEYYVENSKFYLRINLRDRY--LETRVDEISEKYIGPA--LEHKTELLKIYE 233
Query: 358 NLHNTHLVGFKI 393
+L L F++
Sbjct: 234 DLIKRSLQAFRL 245
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 30.7 bits (66), Expect = 1.0
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 1/143 (0%)
Frame = +1
Query: 178 EIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEMMKACQ 357
EID+ + KL +E R++VG YR HA + +T+ + H+ + Q
Sbjct: 49 EIDRKKVKLHVWDTCGQERFRSLVGSYYR---HAIGALLVYDITSRESFYHLEHWLTDLQ 105
Query: 358 NLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQL-KILMEIPEKIWTCIETEDFVKAT 534
L + +V I N V + + + + I MEI K +E E FV +
Sbjct: 106 RLGDPDIVIVLIGNKSDLEADREVRKEEGEAFAREFGLIFMEISAKTNEYVE-EAFVNSA 164
Query: 535 QLFIFARHVNTGLQLQIGGQKSQ 603
R +N G+ +I +K +
Sbjct: 165 HEIY--RKLNFGIIKEICVKKKK 185
>Z74031-3|CAA98455.1| 245|Caenorhabditis elegans Hypothetical
protein F32D8.3 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 644 HCCCTIL*NDCTPGCDFCPPICSCK 570
HC C N+ P C C P C+C+
Sbjct: 71 HCACESTCNNPDPYCSKCEPGCTCR 95
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 187 QVQKKLQYEIERRREELRAM-VGERYRDLIHAADTIEDMRVTTASTLN 327
+V KL E E+ R++L + E+Y++ I ED+R T S LN
Sbjct: 201 RVSAKLSREAEKNRKDLEKRGIIEKYKNFIGEKWNAEDIRDHTVSALN 248
>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 8 protein.
Length = 2329
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 460 QLKILMEIPEKIWTCIETEDFVKATQL--FIFARHVNTGLQLQIGGQKSQPGVQSFHRMV 633
Q+ L + ++ T + +++ + F A+ +N + GG K +P V+ H
Sbjct: 223 QMSTLYRLANQLLTDLVDDNYFYLFDMKSFFTAKALNVAIP---GGPKFEPLVKDLH--T 277
Query: 634 QQQWNSISNFNQTIIR 681
+ WN ++ N+ IIR
Sbjct: 278 DEDWNEFNDINKVIIR 293
>AL032646-1|CAA21676.1| 385|Caenorhabditis elegans Hypothetical
protein Y54E2A.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +1
Query: 91 LIVSIKVKMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREE 234
LIV ++++ + +L E DE ++ S+NE D+ +L+ E+++ RE+
Sbjct: 279 LIVLEEIRVRREHLFE-EGDEPDEAASLNEFDEQIAELREELQKNRED 325
>AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical
protein F13B6.3 protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 593 CPPICSCKPVLTCLAN 546
CPP+ +C PV+TC A+
Sbjct: 384 CPPVSTCPPVVTCPAS 399
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 650 EFHCCCTIL*NDCTPGCDF-CPPICSCKPVLTC 555
E + CC C PG + CPP SC + TC
Sbjct: 46 EQYGCCPFTGGTCCPGTNHCCPPGFSCTTIGTC 78
>AC103567-5|AAL35728.2| 337|Caenorhabditis elegans Hypothetical
protein Y51F10.10 protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 178 EIDQVQKKLQYEIERRREELRA-MVGERYRDLIHAADTIED-MRVTTASTLNHISEMMKA 351
++++ +K + +++ EELR ++ + YR AD +E +R S L HI MKA
Sbjct: 211 KLEKAEKTAKNSDQQQHEELRKRLLTKGYR-----ADIVEKALRCLPKSRLVHIEYYMKA 265
Query: 352 CQNLHNT 372
C+ + T
Sbjct: 266 CRTVEKT 272
>M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical
protein B0303.11 protein.
Length = 903
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -2
Query: 353 HAFIISLM*FKVLAVVTLMSSMVSAA*-IKSLYLSPTIARNSSLLLSISYCS 201
+ F++ L ++ + TL+S +SAA I SLY + +A + + +ISYCS
Sbjct: 384 YVFLVKLSDPEIPSPPTLLSLAISAACFIASLYTNRHLALFIASIFAISYCS 435
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical protein
F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 5.5
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 91 LIVSIKVKMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRR---EELRAMVGERY 261
+I S+ S + L+ +V D + N+I ++++ EIER++ +E+
Sbjct: 747 IIGSVPAGPSSAPLI-LVEDHKDGPITSNQISDTERRISEEIERQKKDEQEIEKSCRSVI 805
Query: 262 RDLIHAADTIEDMRVTTASTL---NHIS--EMMKACQNLHNTHLVGFKISNAP-TPT--- 414
RDL++ + E +V ++L N S + +NL + G P TP+
Sbjct: 806 RDLLNYVEYEEKSQVERKASLLLRNTFSRPNPEELLRNLRLSEATGSTTPRTPLTPSRYV 865
Query: 415 QSYNVNS-NQLHSLSVQLKILMEIPEKI 495
Q +N+NS +L+ + + ++EI E++
Sbjct: 866 QVFNINSFLKLYFIKACILRVLEIAEEL 893
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical protein
F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 5.5
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 91 LIVSIKVKMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRR---EELRAMVGERY 261
+I S+ S + L+ +V D + N+I ++++ EIER++ +E+
Sbjct: 752 IIGSVPAGPSSAPLI-LVEDHKDGPITSNQISDTERRISEEIERQKKDEQEIEKSCRSVI 810
Query: 262 RDLIHAADTIEDMRVTTASTL---NHIS--EMMKACQNLHNTHLVGFKISNAP-TPT--- 414
RDL++ + E +V ++L N S + +NL + G P TP+
Sbjct: 811 RDLLNYVEYEEKSQVERKASLLLRNTFSRPNPEELLRNLRLSEATGSTTPRTPLTPSRYV 870
Query: 415 QSYNVNS-NQLHSLSVQLKILMEIPEKI 495
Q +N+NS +L+ + + ++EI E++
Sbjct: 871 QVFNINSFLKLYFIKACILRVLEIAEEL 898
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical protein
F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 5.5
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 91 LIVSIKVKMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRR---EELRAMVGERY 261
+I S+ S + L+ +V D + N+I ++++ EIER++ +E+
Sbjct: 747 IIGSVPAGPSSAPLI-LVEDHKDGPITSNQISDTERRISEEIERQKKDEQEIEKSCRSVI 805
Query: 262 RDLIHAADTIEDMRVTTASTL---NHIS--EMMKACQNLHNTHLVGFKISNAP-TPT--- 414
RDL++ + E +V ++L N S + +NL + G P TP+
Sbjct: 806 RDLLNYVEYEEKSQVERKASLLLRNTFSRPNPEELLRNLRLSEATGSTTPRTPLTPSRYV 865
Query: 415 QSYNVNS-NQLHSLSVQLKILMEIPEKI 495
Q +N+NS +L+ + + ++EI E++
Sbjct: 866 QVFNINSFLKLYFIKACILRVLEIAEEL 893
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical protein
F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 5.5
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 91 LIVSIKVKMSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRR---EELRAMVGERY 261
+I S+ S + L+ +V D + N+I ++++ EIER++ +E+
Sbjct: 752 IIGSVPAGPSSAPLI-LVEDHKDGPITSNQISDTERRISEEIERQKKDEQEIEKSCRSVI 810
Query: 262 RDLIHAADTIEDMRVTTASTL---NHIS--EMMKACQNLHNTHLVGFKISNAP-TPT--- 414
RDL++ + E +V ++L N S + +NL + G P TP+
Sbjct: 811 RDLLNYVEYEEKSQVERKASLLLRNTFSRPNPEELLRNLRLSEATGSTTPRTPLTPSRYV 870
Query: 415 QSYNVNS-NQLHSLSVQLKILMEIPEKI 495
Q +N+NS +L+ + + ++EI E++
Sbjct: 871 QVFNINSFLKLYFIKACILRVLEIAEEL 898
>U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical
protein C25E10.7 protein.
Length = 145
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Frame = -2
Query: 617 DCTPGCDFCPPICS--CKP 567
DC P C F P +CS CKP
Sbjct: 30 DCEPQCGFDPTVCSLECKP 48
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 123 F*HLYFYRYYQLIILNC-LVKFKYWKIH*YFQMFDVYICA 7
F ++F +Y ++LN + KF++W+ + F Y CA
Sbjct: 110 FSSIFFQLFYIAVVLNTFMAKFQFWRSNENFVRGVAYFCA 149
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 TTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQ-SYNVNSNQLHSLSVQLKILMEI 483
T+ L+ + ++K + +L KIS P N+N S +++K++
Sbjct: 115 TSKKGLSRSASLLKKLKFSDKKNLDELKISIFPLDIAVRKNINLGSGKSTLLEMKLIRND 174
Query: 484 PEKIWTCIETEDFVKATQLF 543
+ C+E +DF++ T+ F
Sbjct: 175 HRNMIQCLEFDDFLEMTRSF 194
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 TTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQ-SYNVNSNQLHSLSVQLKILMEI 483
T+ L+ + ++K + +L KIS P N+N S +++K++
Sbjct: 115 TSKKGLSRSASLLKKLKFSDKKNLDELKISIFPLDIAVRKNINLGSGKSTLLEMKLIRND 174
Query: 484 PEKIWTCIETEDFVKATQLF 543
+ C+E +DF++ T+ F
Sbjct: 175 HRNMIQCLEFDDFLEMTRSF 194
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 TTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQ-SYNVNSNQLHSLSVQLKILMEI 483
T+ L+ + ++K + +L KIS P N+N S +++K++
Sbjct: 115 TSKKGLSRSASLLKKLKFSDKKNLDELKISIFPLDIAVRKNINLGSGKSTLLEMKLIRND 174
Query: 484 PEKIWTCIETEDFVKATQLF 543
+ C+E +DF++ T+ F
Sbjct: 175 HRNMIQCLEFDDFLEMTRSF 194
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 TTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQ-SYNVNSNQLHSLSVQLKILMEI 483
T+ L+ + ++K + +L KIS P N+N S +++K++
Sbjct: 115 TSKKGLSRSASLLKKLKFSDKKNLDELKISIFPLDIAVRKNINLGSGKSTLLEMKLIRND 174
Query: 484 PEKIWTCIETEDFVKATQLF 543
+ C+E +DF++ T+ F
Sbjct: 175 HRNMIQCLEFDDFLEMTRSF 194
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 TTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQ-SYNVNSNQLHSLSVQLKILMEI 483
T+ L+ + ++K + +L KIS P N+N S +++K++
Sbjct: 115 TSKKGLSRSASLLKKLKFSDKKNLDELKISIFPLDIAVRKNINLGSGKSTLLEMKLIRND 174
Query: 484 PEKIWTCIETEDFVKATQLF 543
+ C+E +DF++ T+ F
Sbjct: 175 HRNMIQCLEFDDFLEMTRSF 194
>Z70213-2|CAA94171.1| 304|Caenorhabditis elegans Hypothetical
protein ZK930.2 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 148 DELFQ-SHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTL 324
+EL Q + IN ++ + K + E+E+R+ ++ +GE R + +E M +
Sbjct: 126 EELRQINQDINTLEDITKSSKTELEKRKMKISVAMGEVARMRGFINENLESMNIIHKLET 185
Query: 325 NHISEMMK 348
+ E+ K
Sbjct: 186 SEEEELFK 193
>AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical
protein Y46G5A.31 protein.
Length = 672
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 295 DMRVTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKIL 474
DM + + + LNH + +++ T +V F I P P S+NV S + +++ QLK
Sbjct: 358 DMFIESLARLNHYLKTTSDPRHMGVT-VVAFLIY--PAPANSFNVESLKGQAVTKQLKEA 414
Query: 475 ME-IPEKI 495
++ I EK+
Sbjct: 415 VDRIKEKV 422
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 307 TTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQ-SYNVNSNQLHSLSVQLKILMEI 483
T+ L+ + ++K + +L KIS P N+N S +++K++
Sbjct: 115 TSKKGLSRSASLLKKLKFSDKKNLDELKISIFPLDIAVRKNINLGSGKSTLLEMKLIRND 174
Query: 484 PEKIWTCIETEDFVKATQLF 543
+ C+E +DF++ T+ F
Sbjct: 175 HRNMIQCLEFDDFLEMTRSF 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,806,697
Number of Sequences: 27780
Number of extensions: 298536
Number of successful extensions: 1081
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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