Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o12
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    24   1.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.2  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 534 KAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 635
           K+ Y     K EQ++KE   M E+E  + +  D+
Sbjct: 52  KSIYHRQHSKNEQQRKEMEQMREREREQREHSDR 85


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 435 PIPKYFATSPGGVAHERVVTPPDWV 509
           P   Y+   PG + + + V P +WV
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTNWV 165


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 435 PIPKYFATSPGGVAHERVVTPPDWV 509
           P   Y+   PG + + + V P +WV
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTNWV 165


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 203 LCKQIFDDSEVKSAHLR 253
           LC++ FD   +  +HLR
Sbjct: 66  LCQKAFDQKNLYQSHLR 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,783
Number of Sequences: 438
Number of extensions: 3478
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)