Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o09
         (715 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   6.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   6.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 630 WRVCSAYIDEQFRQYFTDESGLN 698
           W +    + EQ   YFT++ GLN
Sbjct: 207 WYLTKHNVPEQRLNYFTEDVGLN 229


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 630 WRVCSAYIDEQFRQYFTDESGLN 698
           W +    + EQ   YFT++ GLN
Sbjct: 207 WYLTKHNVPEQRLNYFTEDVGLN 229


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 485 KNSRCSR*NRKNDDXRK 535
           KN+RC++ N +N++  K
Sbjct: 413 KNTRCAKSNNQNNNQNK 429


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -1

Query: 664 NCSSMYAEQTRHESSQLIASPKPGVSTIVRRNLTPR 557
           N  S  ++ +R +   L  +P P + +     +TPR
Sbjct: 123 NSPSFLSDHSRDQEQNLYLTPSPQMYSSGGEEITPR 158


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 201 FPL*SSVLINYFAF 160
           FP  S +LINYF F
Sbjct: 11  FPSTSFILINYFIF 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,686
Number of Sequences: 438
Number of extensions: 3905
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)