Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o05
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85033-1|CAA59404.1| 187|Homo sapiens phosphatidylethanolamine ... 177 3e-44
X75252-1|CAA53031.1| 187|Homo sapiens phosphatidylethanolamine ... 177 3e-44
D16111-1|BAA03684.1| 187|Homo sapiens rat phosphatidylethanolam... 177 3e-44
BC031102-1|AAH31102.1| 187|Homo sapiens phosphatidylethanolamin... 177 3e-44
BC017396-1|AAH17396.1| 187|Homo sapiens phosphatidylethanolamin... 177 3e-44
BC008714-1|AAH08714.1| 187|Homo sapiens phosphatidylethanolamin... 177 3e-44
S76773-1|AAD14234.1| 140|Homo sapiens neuropolypeptide h3 protein. 159 8e-39
BC020779-1|AAH20779.1| 223|Homo sapiens phosphatidylethanolamin... 89 2e-17
AY730275-1|AAW56965.1| 227|Homo sapiens cousin-of-RKIP 1 protei... 89 2e-17
AY359109-1|AAQ89467.1| 223|Homo sapiens GWTM1933 protein. 89 2e-17
BC013311-1|AAH13311.1| 346|Homo sapiens mitochondrial ribosomal... 80 6e-15
AF372624-1|AAK54734.1| 105|Homo sapiens PEBP-like protein protein. 55 3e-07
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 31 2.7
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 31 2.7
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 31 2.7
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 31 2.7
AF513324-1|AAP47165.1| 348|Homo sapiens alpha-1,4-galactosyltra... 31 4.7
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 30 8.3
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 30 8.3
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 30 8.3
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 30 8.3
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 30 8.3
>X85033-1|CAA59404.1| 187|Homo sapiens phosphatidylethanolamine
binding protein protein.
Length = 187
Score = 177 bits (431), Expect = 3e-44
Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP-SVKWDA-EPGQYYTLAMTDPDAPSR 370
+ + P L V Y + G LTPTQVK+ P S+ WD + G+ YTL +TDPDAPSR
Sbjct: 17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76
Query: 371 KEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 550
K+P +REWHH+LV N++GN+++SG LS YVGSGPP+ TGLHRYV+L+Y+Q L DEP
Sbjct: 77 KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136
Query: 551 RLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 137 ILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
>X75252-1|CAA53031.1| 187|Homo sapiens phosphatidylethanolamine
binding protein protein.
Length = 187
Score = 177 bits (431), Expect = 3e-44
Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP-SVKWDA-EPGQYYTLAMTDPDAPSR 370
+ + P L V Y + G LTPTQVK+ P S+ WD + G+ YTL +TDPDAPSR
Sbjct: 17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76
Query: 371 KEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 550
K+P +REWHH+LV N++GN+++SG LS YVGSGPP+ TGLHRYV+L+Y+Q L DEP
Sbjct: 77 KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136
Query: 551 RLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 137 ILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
>D16111-1|BAA03684.1| 187|Homo sapiens rat phosphatidylethanolamine
binding protein homologue protein.
Length = 187
Score = 177 bits (431), Expect = 3e-44
Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP-SVKWDA-EPGQYYTLAMTDPDAPSR 370
+ + P L V Y + G LTPTQVK+ P S+ WD + G+ YTL +TDPDAPSR
Sbjct: 17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76
Query: 371 KEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 550
K+P +REWHH+LV N++GN+++SG LS YVGSGPP+ TGLHRYV+L+Y+Q L DEP
Sbjct: 77 KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136
Query: 551 RLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 137 ILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
>BC031102-1|AAH31102.1| 187|Homo sapiens phosphatidylethanolamine
binding protein 1 protein.
Length = 187
Score = 177 bits (431), Expect = 3e-44
Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP-SVKWDA-EPGQYYTLAMTDPDAPSR 370
+ + P L V Y + G LTPTQVK+ P S+ WD + G+ YTL +TDPDAPSR
Sbjct: 17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76
Query: 371 KEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 550
K+P +REWHH+LV N++GN+++SG LS YVGSGPP+ TGLHRYV+L+Y+Q L DEP
Sbjct: 77 KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136
Query: 551 RLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 137 ILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
>BC017396-1|AAH17396.1| 187|Homo sapiens phosphatidylethanolamine
binding protein 1 protein.
Length = 187
Score = 177 bits (431), Expect = 3e-44
Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP-SVKWDA-EPGQYYTLAMTDPDAPSR 370
+ + P L V Y + G LTPTQVK+ P S+ WD + G+ YTL +TDPDAPSR
Sbjct: 17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76
Query: 371 KEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 550
K+P +REWHH+LV N++GN+++SG LS YVGSGPP+ TGLHRYV+L+Y+Q L DEP
Sbjct: 77 KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136
Query: 551 RLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 137 ILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
>BC008714-1|AAH08714.1| 187|Homo sapiens phosphatidylethanolamine
binding protein 1 protein.
Length = 187
Score = 177 bits (431), Expect = 3e-44
Identities = 82/154 (53%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP-SVKWDA-EPGQYYTLAMTDPDAPSR 370
+ + P L V Y + G LTPTQVK+ P S+ WD + G+ YTL +TDPDAPSR
Sbjct: 17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76
Query: 371 KEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 550
K+P +REWHH+LV N++GN+++SG LS YVGSGPP+ TGLHRYV+L+Y+Q L DEP
Sbjct: 77 KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136
Query: 551 RLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 137 ILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
>S76773-1|AAD14234.1| 140|Homo sapiens neuropolypeptide h3 protein.
Length = 140
Score = 159 bits (386), Expect = 8e-39
Identities = 69/119 (57%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
Frame = +2
Query: 299 SVKWDA-EPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGP 475
S+ WD + G+ YTL +TDPDAPSRK+P +REWHH+LV N++GN+++SG LS YVGSGP
Sbjct: 5 SISWDGLDSGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGP 64
Query: 476 PEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
P+ TGLHRYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 65 PKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 123
>BC020779-1|AAH20779.1| 223|Homo sapiens
phosphatidylethanolamine-binding protein 4 protein.
Length = 223
Score = 88.6 bits (210), Expect = 2e-17
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Frame = +2
Query: 293 EPSVKWD-AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVN----SGETLSQ 457
EP VK+ A G Y L M DPDAPSR EP R W HWLV +I+G ++ G+ LS
Sbjct: 76 EPIVKFPGAVDGATYILVMVDPDAPSRAEPRQRFWRHWLVTDIKGADLKEGKIQGQELSA 135
Query: 458 YVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIA 637
Y PP +G HRY F +Y Q K+ P+ T R ++K+ F +++LG+P A
Sbjct: 136 YQAPSPPAHSGFHRYQFFVYLQEGKVISLLPKENKT----RGSWKMDRFLNRFHLGEPEA 191
>AY730275-1|AAW56965.1| 227|Homo sapiens cousin-of-RKIP 1 protein
protein.
Length = 227
Score = 88.6 bits (210), Expect = 2e-17
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Frame = +2
Query: 293 EPSVKWD-AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVN----SGETLSQ 457
EP VK+ A G Y L M DPDAPSR EP R W HWLV +I+G ++ G+ LS
Sbjct: 76 EPIVKFPGAVDGATYILVMVDPDAPSRAEPRQRFWRHWLVTDIKGADLKEGKIQGQELSA 135
Query: 458 YVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIA 637
Y PP +G HRY F +Y Q K+ P+ T R ++K+ F +++LG+P A
Sbjct: 136 YQAPSPPAHSGFHRYQFFVYLQEGKVISLLPKENKT----RGSWKMDRFLNRFHLGEPEA 191
>AY359109-1|AAQ89467.1| 223|Homo sapiens GWTM1933 protein.
Length = 223
Score = 88.6 bits (210), Expect = 2e-17
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Frame = +2
Query: 293 EPSVKWD-AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVN----SGETLSQ 457
EP VK+ A G Y L M DPDAPSR EP R W HWLV +I+G ++ G+ LS
Sbjct: 76 EPIVKFPGAVDGATYILVMVDPDAPSRAEPRQRFWRHWLVTDIKGADLKKGKIQGQELSA 135
Query: 458 YVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIA 637
Y PP +G HRY F +Y Q K+ P+ T R ++K+ F +++LG+P A
Sbjct: 136 YQAPSPPAHSGFHRYQFFVYLQEGKVISLLPKENKT----RGSWKMDRFLNRFHLGEPEA 191
>BC013311-1|AAH13311.1| 346|Homo sapiens mitochondrial ribosomal
protein L38 protein.
Length = 346
Score = 80.2 bits (189), Expect = 6e-15
Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Frame = +2
Query: 197 IPKAPAALLQVKYPSGVE----VKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDPDAP 364
+P+ P L V Y G + V GNE+TPT+ P V ++AE G +TL +T D
Sbjct: 134 VPRVP---LHVAYAVGEDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLWTLLLTSLDG- 189
Query: 365 SRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFD 544
EP E+ HWL+ NI GN V G+ Y+ P +G+HR FLL+KQ + F
Sbjct: 190 HLLEPD-AEYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFS 248
Query: 545 E-PRLTNTSSDKRANFKIAEFAKKY 616
E R + + F+ +F KK+
Sbjct: 249 EDARPSPCYQLAQRTFRTFDFYKKH 273
>AF372624-1|AAK54734.1| 105|Homo sapiens PEBP-like protein protein.
Length = 105
Score = 54.8 bits (126), Expect = 3e-07
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 344 MTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFLLYK 520
MTDPD P +P +E HW+V +I G + G+ L+ Y P G+HRYVF+L+K
Sbjct: 1 MTDPDVPGPSDPYMKEHLHWMVTDIPGTTDSTFGKELTSY--EKPKPNIGIHRYVFVLFK 58
Query: 521 Q 523
Q
Sbjct: 59 Q 59
>U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 REWHHWLVGNIQGNEVN-SGETLSQYVGSGPPEK 484
R WH W +G + E N S S G GPP K
Sbjct: 413 RRWHRWRLGKVLWEERNTSNHRASSSPGHGPPSK 446
>L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 REWHHWLVGNIQGNEVN-SGETLSQYVGSGPPEK 484
R WH W +G + E N S S G GPP K
Sbjct: 413 RRWHRWRLGKVLWEERNTSNHRASSSPGHGPPSK 446
>BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 REWHHWLVGNIQGNEVN-SGETLSQYVGSGPPEK 484
R WH W +G + E N S S G GPP K
Sbjct: 413 RRWHRWRLGKVLWEERNTSNHRASSSPGHGPPSK 446
>BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 REWHHWLVGNIQGNEVN-SGETLSQYVGSGPPEK 484
R WH W +G + E N S S G GPP K
Sbjct: 413 RRWHRWRLGKVLWEERNTSNHRASSSPGHGPPSK 446
>AF513324-1|AAP47165.1| 348|Homo sapiens
alpha-1,4-galactosyltransferase protein.
Length = 348
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = -2
Query: 479 PEVQSP-RTG-TKFRRSLPR-CPGCCQP---ASGAIREMWVLYGTAHQGRSWPECSTVLA 318
P SP RTG + R S PR C GC P ++ R G WP C A
Sbjct: 283 PSTPSPGRTGRSTLRTSTPRSCRGCSVPPMLSTCGTRRARARGSRPRPGHCWPSCMPATA 342
Query: 317 PR 312
PR
Sbjct: 343 PR 344
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 248 EVKEGNELTPTQVKDEPS---VKWDAEPGQYYTLAMTDPDAPSRKEPT 382
E E + PT K+ P+ VK DA+P + +A +PD KEP+
Sbjct: 895 EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 942
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 248 EVKEGNELTPTQVKDEPS---VKWDAEPGQYYTLAMTDPDAPSRKEPT 382
E E + PT K+ P+ VK DA+P + +A +PD KEP+
Sbjct: 901 EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 948
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 248 EVKEGNELTPTQVKDEPS---VKWDAEPGQYYTLAMTDPDAPSRKEPT 382
E E + PT K+ P+ VK DA+P + +A +PD KEP+
Sbjct: 233 EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 280
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 248 EVKEGNELTPTQVKDEPS---VKWDAEPGQYYTLAMTDPDAPSRKEPT 382
E E + PT K+ P+ VK DA+P + +A +PD KEP+
Sbjct: 901 EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 948
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 248 EVKEGNELTPTQVKDEPS---VKWDAEPGQYYTLAMTDPDAPSRKEPT 382
E E + PT K+ P+ VK DA+P + +A +PD KEP+
Sbjct: 909 EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 956
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,737,570
Number of Sequences: 237096
Number of extensions: 2519848
Number of successful extensions: 5782
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5769
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -