Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20o05
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical ... 223 1e-58
AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical ... 221 3e-58
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 108 4e-24
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 37 0.011
U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical pr... 32 0.41
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 31 0.54
U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical pr... 31 0.94
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 30 1.2
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 30 1.6
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 30 1.6
AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine re... 29 2.2
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41559-1|AAC24260.1| 373|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 28 6.7
AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical ... 27 8.8
>AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical
protein F40A3.3a protein.
Length = 221
Score = 223 bits (544), Expect = 1e-58
Identities = 100/174 (57%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Frame = +2
Query: 140 RAMSTVA-KSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWD 313
R ++T+A ++F +V+PDV+ P+ ++ VK+ SGVE GN LTPTQVKD P VKWD
Sbjct: 32 RGLATMAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWD 91
Query: 314 AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGL 493
AEPG YTL TDPDAPSRKEPT+REWHHWLV NI GN++ G+TLS+Y+G+GPP KTGL
Sbjct: 92 AEPGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGL 151
Query: 494 HRYVFLLYKQPSKL-TFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
HRYV+L+YKQ ++ + RLTNTS DKR +K A+F K+ LG P+ GN ++
Sbjct: 152 HRYVYLIYKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQ 205
>AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical
protein F40A3.3b protein.
Length = 185
Score = 221 bits (541), Expect = 3e-58
Identities = 98/167 (58%), Positives = 125/167 (74%), Gaps = 2/167 (1%)
Frame = +2
Query: 158 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYY 334
A++F +V+PDV+ P+ ++ VK+ SGVE GN LTPTQVKD P VKWDAEPG Y
Sbjct: 3 AEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAEPGALY 62
Query: 335 TLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLL 514
TL TDPDAPSRKEPT+REWHHWLV NI GN++ G+TLS+Y+G+GPP KTGLHRYV+L+
Sbjct: 63 TLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLI 122
Query: 515 YKQPSKL-TFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 652
YKQ ++ + RLTNTS DKR +K A+F K+ LG P+ GN ++
Sbjct: 123 YKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQ 169
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 108 bits (259), Expect = 4e-24
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +2
Query: 146 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKW---DA 316
MS ++ +F ++ P +I AP L + + G++V+ G + +K+ P +W A
Sbjct: 1 MSDISAAFAQHEITPKIIENAPKQKLHLCW-DGIQVEPGMTMQVRNLKNAP--RWALPGA 57
Query: 317 EPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNE----VNSGETLSQYVGSGPPEK 484
+P YT+ M DPD SRK P+ EW HWLV NI + +N G+ Y P +
Sbjct: 58 DPESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNIPASNIIDGINGGQHQMAYGSPAPGPR 117
Query: 485 TGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFY 649
T LHRYV L+++ + R++ RA F + +F +K LGDPIAGNF+
Sbjct: 118 TDLHRYVILMWEHAGR------RISVPKPSSRAKFNVKQFIEKNKLGDPIAGNFF 166
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Frame = +2
Query: 221 LQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA--EPGQYYTLAMTDPDAPSRKEPTFREW 394
LQV + + + V GN +T P + ++ G + TL M + D + E
Sbjct: 157 LQVNFENDIVVHSGNVITANSTLKRPEITIESVGNGGGFNTLLMINLDGNALDLGKNGEI 216
Query: 395 HHWLVGNI-QGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSS 571
W++ NI G +++G + Y+ P TG HR F+L++ + F ++ S
Sbjct: 217 VQWMISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVLFRHEKPVDF---QIQGNSL 273
Query: 572 DKRANFKIAEFAKKYNLG-DPIAGNFYE 652
D R + +I++F KK+ P A F++
Sbjct: 274 DTRIH-EISKFYKKHEATITPSAIRFFQ 300
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 450 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GI 629
C ST+ +K Q C TCS C+++ SS S+S S + ++ S SS S++
Sbjct: 18 CTSTFYTTAQKTQYCASTCSLCSDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSS 77
Query: 630 RLRATST 650
+TS+
Sbjct: 78 SASSTSS 84
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 450 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 578
C S++ K Q C TCS C+++ SS S+S S + T+
Sbjct: 147 CTSSFYTTAIKTQYCAATCSLCSSSSDSSSSSSTASTSSSCTD 189
>U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical
protein F41G3.19 protein.
Length = 146
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 441 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 578
A C ++ L L K Q C TC CT++ +S +TS S + TN
Sbjct: 64 ASYCTNSVYLTLMKTQ-CPKTCGYCTSSSSTSSTTSSSSTCVDLTN 108
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 398 HWLVGNIQGNEVNS----GETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNT 565
HWL +I +N+ G T + YV P + + H Y+F+L QP+ + E
Sbjct: 375 HWLEVDIPAANLNAANGNGLTKADYVPLIPKKPSTCHSYLFVLLAQPASMQTLE-SYCEG 433
Query: 566 SSDKRANFKIAEFAKKYNL 622
+ R F++ F +++ L
Sbjct: 434 MCETRKKFRLELFKQQHGL 452
>U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical
protein F41G3.20 protein.
Length = 232
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 441 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLP 599
A C ++ L L K+Q C TC CT++ ++ S+S + L + +S P
Sbjct: 101 ASYCANSAYLTLMKQQ-CPKTCGYCTSSSATTTSSSSTCIDLTNASTGVSDCP 152
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 441 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS 548
A C ++ L L K+Q C TC CT++ SS S+S
Sbjct: 155 ASYCTNSAYLTLMKQQ-CPKTCGYCTSSSSSSSSSS 189
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 495 CRPVFSGG-PEPTYWDKVSPEFTSLPWMLPTSQWCHSRNVGSLRDG--ASGSVMA 340
CRP SGG P PTY D S P T+Q + VG++ +G +G MA
Sbjct: 18 CRPHTSGGAPNPTYSD-ASTTLLKYPLAAGTNQNRRRQQVGTMNNGDPVAGGPMA 71
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +2
Query: 263 NELTPTQVKDEPSVKWDA-EPGQYYTLAMTDPDAPSRKEPTF----REWHHWLVGNIQGN 427
N L +V+ + V DA E G ++ T+P P + P E W + GN
Sbjct: 324 NLLEKVRVRCDTDVVRDAKEKGYNHSTDSTEPAIPPSEAPKIPSLSSEQKQWKDQLLNGN 383
Query: 428 EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTF 541
E+ GE L + + P+K LH L++ P K F
Sbjct: 384 EILIGEELDRVLADVSPQKP-LH----LMFIAPGKGRF 416
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +2
Query: 263 NELTPTQVKDEPSVKWDA-EPGQYYTLAMTDPDAPSRKEPTF----REWHHWLVGNIQGN 427
N L +V+ + V DA E G ++ T+P P + P E W + GN
Sbjct: 324 NLLEKVRVRCDTDVVRDAKEKGYNHSTDSTEPAIPPSEAPKIPSLSSEQKQWKDQLLNGN 383
Query: 428 EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTF 541
E+ GE L + + P+K LH L++ P K F
Sbjct: 384 EILIGEELDRVLADVSPQKP-LH----LMFIAPGKGRF 416
>AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine
receptor, class sx protein7 protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 524 VVCTRGTRICAGLSFPEVQSPRT 456
++C GT + GL+FP++Q RT
Sbjct: 58 IICLLGTMVDVGLAFPDIQLDRT 80
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 647 RSCPQSDPLGCTSWRTRQF 591
+SCP D GCT+W+ F
Sbjct: 251 KSCPSVDSYGCTNWKNYDF 269
>U41559-1|AAC24260.1| 373|Caenorhabditis elegans Hypothetical
protein C26B2.8 protein.
Length = 373
Score = 28.3 bits (60), Expect = 5.0
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Frame = +2
Query: 164 SFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTP---TQVKDEP--SVKWDAEPGQ 328
+F +++VP ++P APA L + S ++ G ++ D P S + + +
Sbjct: 201 TFRENRIVPRLLPVAPAYELIATF-SDEQISMGQLFDADILDKLADPPVMSAGVELQDEK 259
Query: 329 YYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG--NEVNSGETLSQYVGSGPPEKT----G 490
YT+ + D + K T WLV NI ++ V PP+ T G
Sbjct: 260 LYTIILAD---ATSKAVT------WLVANIAAFDGQLEIHRRTKSAVSYQPPDSTDRPVG 310
Query: 491 LHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKY 616
+H + LY+Q T+ + L + D +F E+ ++Y
Sbjct: 311 MHTMILALYEQND--TWTQKDLARIAMD---DFNFTEWLEEY 347
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -3
Query: 616 VLLGELGNFEIGTFVARSVSESRLVECELRWLFVQEEHVSVQACLFRRSR 467
V+ LG+ G + + + EC LR+L ++H + CL + R
Sbjct: 1536 VVQSVLGDNTAGGYATAAAGVETVDECGLRYLMAMKQHEYLMVCLPMKQR 1585
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 11 LIFGLISRHPFFLVCERQEMGALIRCAIVLLTVATMVNFRVLTRAMSTVAK 163
+IF L F V E ++MG +RC V++ + N VL R M +A+
Sbjct: 1634 IIFDLYEN--FLNVSEVEDMGERVRCLSVMIELLPKPNRAVLDRLMYHLAR 1682
>AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical
protein F42G8.5 protein.
Length = 304
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 143 AMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEG-NELTPTQVKDEPSVKWDAE 319
AMS V K + ++ P VIP L + P+ + V N L T V S D
Sbjct: 188 AMSNVVKPHDEKKLYPPVIPGCSTLSLHRRSPNNIFVASPYNTLRATSVGRYQSGFLDTN 247
Query: 320 PGQYYTLAMTDPDAPSRKE 376
L P SR++
Sbjct: 248 SIMENRLGSRQPSVASRRQ 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,347
Number of Sequences: 27780
Number of extensions: 369766
Number of successful extensions: 1150
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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