Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20o01
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56965-11|AAB52666.1|  137|Caenorhabditis elegans Hypothetical p...    55   4e-08
U88168-6|AAC24401.1|  127|Caenorhabditis elegans Hypothetical pr...    48   5e-06
U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical pr...    39   0.004
U57054-3|AAA98725.1|  151|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z66560-2|CAE17736.1|  127|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z47068-6|CAA87334.2|  272|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    28   5.8  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U56965-11|AAB52666.1|  137|Caenorhabditis elegans Hypothetical
           protein C15H9.9 protein.
          Length = 137

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
 Frame = +1

Query: 121 FIIFSLMPLALS--IKCWNCRSSTDPKCADPFDNSTVPITDCNQEKGLSHLPGMKPSMCR 294
           F++ + + L +S  I C+ C S+ +P C    D +                 G     CR
Sbjct: 6   FVLLASLALGVSANISCYQCTSNENPTCDANDDGALEAFKKTCTPLTEGTFKGNAAVGCR 65

Query: 295 KIRQKVNGEWRYFRDCAYLGEVGIQGDERFCLMRTGTYNIFVEYCTC-NSKDG--CNS-S 462
           KI Q V G     R+CAY GE  + G     L +TG + I + Y  C N K G  CNS +
Sbjct: 66  KITQSVEGVLSVVRECAYSGE-PVDG-----LKKTGNHAIRIHYYQCENEKAGTPCNSVA 119

Query: 463 SVISPLPIFLVVLVAL 510
            V SPL I  ++ + L
Sbjct: 120 GVFSPLSILSLIAIYL 135


>U88168-6|AAC24401.1|  127|Caenorhabditis elegans Hypothetical
           protein K11H12.7 protein.
          Length = 127

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
 Frame = +1

Query: 118 FFIIF-SLMPLALSIKCWNCRSSTDPKCADPFD--NSTVPITDCNQEKGLSHLPGMKPSM 288
           F I+F SL  ++ ++ C+ C S   P+C   ++  N   P+      K    +  +KP  
Sbjct: 3   FLIVFASLFAVSAALNCYICNSLNQPECVHNYEKFNKICPV------KSFGGMKSVKPLG 56

Query: 289 CRKIRQKVNGEWRYFRDCAYLGEVGIQGDERFCLMRTGTYNIFVEYCTCNSKDGCNSSSV 468
           CR  RQ V  E    R+CAY GE      ER      G+  +   Y  C S++ CNS+  
Sbjct: 57  CRVSRQYVKEETSIVRECAYTGE----DIER--KSNKGSLGVSRVYSQC-SENLCNSAES 109

Query: 469 ISPLPIFLVVLVALSSFKI 525
            +    FL   V ++ FK+
Sbjct: 110 STH---FLTAAVFIAIFKL 125


>U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical
           protein K11H12.6 protein.
          Length = 132

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = +1

Query: 121 FIIFS-LMPLALSIKCWNCRSSTDPKCADPFD--NSTVPITDCNQEKGLSHLPGMKPSMC 291
           FI+F+ L  ++  + C+ C S   P C D +   N+  P+      + L  +   +P  C
Sbjct: 4   FIVFAPLFAVSAPLNCYICNSKKQPDCIDNYQAFNTICPV------RSLGGVKLHEPVGC 57

Query: 292 RKIRQKVNGEWRYFRDCAYLGE 357
           R  RQ    +    R+C YLGE
Sbjct: 58  RVTRQYSKEKMWIIRECGYLGE 79


>U57054-3|AAA98725.1|  151|Caenorhabditis elegans Hypothetical
           protein B0478.3 protein.
          Length = 151

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
 Frame = +1

Query: 103 SNFVGFFIIFSLMPLALSIKCWNCRSSTDPKCADPFDNSTVPITD--CNQEKGLSHLPGM 276
           SNF+ + ++ SL+   + + C    S  D        N+T+P ++  C   +    +P +
Sbjct: 9   SNFLIYILVTSLIAFKICVFCQQTISIGDTGVTLATMNNTIPASNFSCGANRFTEFIPQL 68

Query: 277 -KPSMCRKIRQKVNGEWRYFRDCAYLGEVGIQ-GDERFCL 390
              + C+ +R  +N       +C Y  ++G    D  FCL
Sbjct: 69  FNSTECKNLRDPMNVCCETHDNC-YNTQIGKDFCDNEFCL 107


>Z66560-2|CAE17736.1|  127|Caenorhabditis elegans Hypothetical
           protein D1053.4 protein.
          Length = 127

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 427 CTCNSKDGCNSSSVISPLPIFLVVLVAL 510
           C CN +D CNS+ + S    F VV V L
Sbjct: 95  CVCNERDFCNSALLQSLTISFFVVFVVL 122


>Z47068-6|CAA87334.2|  272|Caenorhabditis elegans Hypothetical
           protein F15G9.5 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 433 CNSKDGCNSSSVISPLPIFLVVLVALSSF 519
           CN    C+SS +   +P F V+LV+L SF
Sbjct: 243 CNKYGVCSSSHISFLVPFFSVILVSLISF 271


>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 211 DNSTVPITDCNQEKGLSHLPGMKPSMCRKIRQKVNGEWRYFRDCA 345
           DN   P +  ++EK  S L G +    + +R+     WRYF D +
Sbjct: 167 DNLQAPGSIKDEEKLRSWLAGYEAEAIKVLREVALSGWRYFNDAS 211


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 27  LIIIKYFCKLFTTF--STQLYHGN*QT**FCWFFYYF 131
           LII  +FC + TTF   + ++H N +     WF  YF
Sbjct: 11  LIIALHFCGIITTFLPISSIFHDNFEYLNEIWFLVYF 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,461,578
Number of Sequences: 27780
Number of extensions: 291243
Number of successful extensions: 810
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)