Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20n13
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097477-1|BAC05069.1|  425|Homo sapiens protein ( Homo sapiens ...    72   1e-12
BC029519-1|AAH29519.1|  276|Homo sapiens chromosome 6 open readi...    36   0.089
AL136131-3|CAI19961.1|  306|Homo sapiens chromosome 6 open readi...    36   0.089
AL136131-2|CAC19508.1|  276|Homo sapiens chromosome 6 open readi...    36   0.089
AK055407-1|BAB70918.1|  306|Homo sapiens protein ( Homo sapiens ...    36   0.089

>AK097477-1|BAC05069.1|  425|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40158 fis, clone TESTI2015246, weakly similar to
           MLO2 PROTEIN. ).
          Length = 425

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/56 (51%), Positives = 43/56 (76%)
 Frame = +2

Query: 455 EKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCPEAKD 622
           E VV+++DVL+E ++ E++A AVLG  D + C+YS G +KRQA+YAC TC PE ++
Sbjct: 15  EPVVSLVDVLEEDEELENEACAVLGGGDSEKCSYSQGSVKRQALYACSTCTPEGEE 70


>BC029519-1|AAH29519.1|  276|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 276

 Score = 36.3 bits (80), Expect = 0.089
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +3

Query: 108 EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDAL 281
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQL 68


>AL136131-3|CAI19961.1|  306|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 306

 Score = 36.3 bits (80), Expect = 0.089
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +3

Query: 108 EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDAL 281
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQL 68


>AL136131-2|CAC19508.1|  276|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 276

 Score = 36.3 bits (80), Expect = 0.089
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +3

Query: 108 EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDAL 281
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQL 68


>AK055407-1|BAB70918.1|  306|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30845 fis, clone FEBRA2002727. ).
          Length = 306

 Score = 36.3 bits (80), Expect = 0.089
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +3

Query: 108 EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDAL 281
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQL 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,873,671
Number of Sequences: 237096
Number of extensions: 1697157
Number of successful extensions: 7009
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7009
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)