Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20n13
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75550-12|CAA99920.2|  356|Caenorhabditis elegans Hypothetical p...    46   3e-05
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p...    29   2.1  
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep...    29   2.1  
Z83113-2|CAB05544.1|  479|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z69718-1|CAA93535.1|  119|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U23454-3|AAC46518.1|  192|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z75550-12|CAA99920.2|  356|Caenorhabditis elegans Hypothetical
           protein T22C1.1 protein.
          Length = 356

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +2

Query: 455 EKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCP 610
           E+ VT+ ++++     ED A+ +    +   CTY+ GY  RQ ++ C+TC P
Sbjct: 20  EEAVTLGEIVETIDYLEDKADVLFATQNPNVCTYAEGYKPRQTLFTCLTCTP 71


>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
            protein 68 protein.
          Length = 5079

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -1

Query: 336  NFAKKPVDYAPIVLFKDLSERHLLGQQRCNNLDPWRKSVPNIVRW*NGFRPVVLL 172
            NFA KP+D + + L KD+        +  + +  W K V N +    GF P+ L+
Sbjct: 2944 NFAPKPIDLSSMTLEKDMVNAAEKMAEHSHLI--WAKKVMNDLNTKGGFMPIPLV 2996


>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
            protein.
          Length = 5071

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -1

Query: 336  NFAKKPVDYAPIVLFKDLSERHLLGQQRCNNLDPWRKSVPNIVRW*NGFRPVVLL 172
            NFA KP+D + + L KD+        +  + +  W K V N +    GF P+ L+
Sbjct: 2949 NFAPKPIDLSSMTLEKDMVNAAEKMAEHSHLI--WAKKVMNDLNTKGGFMPIPLV 3001


>Z83113-2|CAB05544.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.4 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 146 NHFIITEFSNS-TTGRKPFHHRTILGTDLRHGSRLLHRCWPN 268
           N  + T F++  T G KP  HR++   DL  GS  L   WPN
Sbjct: 180 NILLETLFTDEPTVGHKPAAHRSVAAFDLGGGSTQL-TYWPN 220


>Z69718-1|CAA93535.1|  119|Caenorhabditis elegans Hypothetical
           protein W06D11.2 protein.
          Length = 119

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 321 PVDYAPIVLFKDLSERHLLGQQRCNN 244
           P +  P  L  D   RHL G+QRC N
Sbjct: 5   PANPVPRTLLTDEEVRHLYGKQRCLN 30


>U23454-3|AAC46518.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.4 protein.
          Length = 192

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 283 QIFKKYDWRVINRLF 327
           Q+F+ YDWR I  LF
Sbjct: 119 QVFESYDWRTIKELF 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,266,970
Number of Sequences: 27780
Number of extensions: 297299
Number of successful extensions: 715
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)