Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20n11
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005014-1|AAH05014.1| 293|Homo sapiens SPRY domain containing ... 32 1.5
L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 31 3.4
BX957218-1|CAF29508.1| 144|Homo sapiens hypothetical protein pr... 31 3.4
BC072680-1|AAH72680.1| 105|Homo sapiens natural killer-tumor re... 31 3.4
AK097776-1|BAC05170.1| 566|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 31 3.4
BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein. 30 5.9
AK096404-1|BAC04780.1| 602|Homo sapiens protein ( Homo sapiens ... 30 5.9
BC112284-1|AAI12285.1| 566|Homo sapiens dynein, axonemal, heavy... 30 7.8
BC105107-1|AAI05108.1| 566|Homo sapiens dynein, axonemal, heavy... 30 7.8
>BC005014-1|AAH05014.1| 293|Homo sapiens SPRY domain containing 5
protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/74 (18%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +3
Query: 252 HDARSHYFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTKHREI--EKDTTMLYPYGP 425
H+ H+ + +RK+ +++++ ++KAR++ + EL+ +++ + D +L +G
Sbjct: 32 HEEEQHHLERLRKEGEDIFQQLNESKARMEHSRELLRGMYEDLKQMCHKADVELLQAFGD 91
Query: 426 LAEDHAYISTQRTE 467
+ + + Q +E
Sbjct: 92 ILHRYESLLLQVSE 105
>L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 513 LGVLPVVLFAECCPQTCKLFIDLLQGD-GLG 602
+G + LF++ CP+TCK F+ L G+ GLG
Sbjct: 20 VGRIMFQLFSDICPKTCKNFLCLCSGEKGLG 50
>BX957218-1|CAF29508.1| 144|Homo sapiens hypothetical protein
protein.
Length = 144
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 513 LGVLPVVLFAECCPQTCKLFIDLLQGD-GLG 602
+G + LF++ CP+TCK F+ L G+ GLG
Sbjct: 59 VGRIMFQLFSDICPKTCKNFLCLCSGEKGLG 89
>BC072680-1|AAH72680.1| 105|Homo sapiens natural killer-tumor
recognition sequence protein.
Length = 105
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 513 LGVLPVVLFAECCPQTCKLFIDLLQGD-GLG 602
+G + LF++ CP+TCK F+ L G+ GLG
Sbjct: 20 VGRIMFQLFSDICPKTCKNFLCLCSGEKGLG 50
>AK097776-1|BAC05170.1| 566|Homo sapiens protein ( Homo sapiens
cDNA FLJ40457 fis, clone TESTI2041730, weakly similar to
DYNEIN BETA CHAIN, CILIARY. ).
Length = 566
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 YFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK---HREIEKDTTMLYPYGPLAEDH 440
Y +E+R+ L+ R+ KAK ++ ++ ++DW R+ K +L G +A +
Sbjct: 469 YIQEVREILHNLHNRMQKAKQNIEGISQAMKDWSANPLFERKDNKKEALLDLDGRIANLN 528
Query: 441 AYISTQRTEATKVYITLRVRE 503
+ R K+ + VR+
Sbjct: 529 KRYAAVRDAGVKIQAMVAVRK 549
>AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related
protein protein.
Length = 1462
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 513 LGVLPVVLFAECCPQTCKLFIDLLQGD-GLG 602
+G + LF++ CP+TCK F+ L G+ GLG
Sbjct: 20 VGRIMFQLFSDICPKTCKNFLCLCSGEKGLG 50
>BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein.
Length = 1884
Score = 30.3 bits (65), Expect = 5.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 243 PKRHDARSHYFKEIRKDNLQLYKRIVKAKARVQTTAELIED 365
P H+A Y +++ +N +YKR +A ++ T + D
Sbjct: 177 PNIHEAVVAYLEQLNSENYSIYKRTAEAVYSIECTCNFLSD 217
>AK096404-1|BAC04780.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ39085 fis, clone NT2RP7019064. ).
Length = 602
Score = 30.3 bits (65), Expect = 5.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 243 PKRHDARSHYFKEIRKDNLQLYKRIVKAKARVQTTAELIED 365
P H+A Y +++ +N +YKR +A ++ T + D
Sbjct: 520 PNIHEAVVAYLEQLNSENYSIYKRTAEAVYSIECTCNFLSD 560
>BC112284-1|AAI12285.1| 566|Homo sapiens dynein, axonemal, heavy
chain 17 protein.
Length = 566
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 YFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK---HREIEKDTTMLYPYGPLAEDH 440
Y +E+R+ L R+ KAK ++ ++ ++DW R+ K +L G +A +
Sbjct: 469 YIQEVREILHNLQNRMQKAKQNIEGISQAMKDWSANPLFERKDNKKEALLDLDGRIANLN 528
Query: 441 AYISTQRTEATKVYITLRVRE 503
+ R K+ + VR+
Sbjct: 529 KRYAAVRDAGVKIQAMVAVRK 549
>BC105107-1|AAI05108.1| 566|Homo sapiens dynein, axonemal, heavy
chain 17 protein.
Length = 566
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 YFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK---HREIEKDTTMLYPYGPLAEDH 440
Y +E+R+ L R+ KAK ++ ++ ++DW R+ K +L G +A +
Sbjct: 469 YIQEVREILHNLQNRMQKAKQNIEGISQAMKDWSANPLFERKDNKKEALLDLDGRIANLN 528
Query: 441 AYISTQRTEATKVYITLRVRE 503
+ R K+ + VR+
Sbjct: 529 KRYAAVRDAGVKIQAMVAVRK 549
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,989,471
Number of Sequences: 237096
Number of extensions: 1407963
Number of successful extensions: 3929
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3929
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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