Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20n04
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    29   4.5  
AY094821-1|AAM11174.1|  310|Drosophila melanogaster LD35517p pro...    28   6.0  
AE013599-1410|AAF58564.1|  310|Drosophila melanogaster CG8862-PA...    28   6.0  

>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 243  TFLTNLERVPGTPIIICHA*PDTVHERSSGIIEIYWQEL 359
            T L N+E  PGTP  IC A P     R   ++E   Q+L
Sbjct: 2706 THLVNVELEPGTPPEICFA-PKVEETRRRSLVETMEQKL 2743


>AY094821-1|AAM11174.1|  310|Drosophila melanogaster LD35517p
           protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 452 HWAFRTVT-DSIAVNDQ*ENIQ*KKEVDVSFH*FLPIDFNNARRSFMNSIWLCVANNNR 279
           HW F  +T +S+A ND  +  +   + D S H F      + RRS  +   +  A N+R
Sbjct: 105 HWVFEHLTAESVAKNDAVDRSKCDFKQDESIHPFFRSQNTDYRRSGYDRGHMAAAGNHR 163


>AE013599-1410|AAF58564.1|  310|Drosophila melanogaster CG8862-PA
           protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 452 HWAFRTVT-DSIAVNDQ*ENIQ*KKEVDVSFH*FLPIDFNNARRSFMNSIWLCVANNNR 279
           HW F  +T +S+A ND  +  +   + D S H F      + RRS  +   +  A N+R
Sbjct: 105 HWVFEHLTAESVAKNDAVDRSKCDFKQDESIHPFFRSQNTDYRRSGYDRGHMAAAGNHR 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,084,096
Number of Sequences: 53049
Number of extensions: 323751
Number of successful extensions: 723
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)