Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20m20
         (375 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071171-1|AAH71171.1|  500|Homo sapiens endonuclease domain con...    28   8.6  
BC026191-1|AAH26191.1|  500|Homo sapiens endonuclease domain con...    28   8.6  
AB020637-1|BAA74853.1|  523|Homo sapiens KIAA0830 protein protein.     28   8.6  

>BC071171-1|AAH71171.1|  500|Homo sapiens endonuclease domain
           containing 1 protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 210 FLKLNSNIYW*IVTMLKNFI-FLGIATKNILFG 115
           F+KL   IY+ +V +LKN + FL   TK ++ G
Sbjct: 339 FIKLFQLIYYLVVAILKNIVYFLWCVTKQVING 371


>BC026191-1|AAH26191.1|  500|Homo sapiens endonuclease domain
           containing 1 protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 210 FLKLNSNIYW*IVTMLKNFI-FLGIATKNILFG 115
           F+KL   IY+ +V +LKN + FL   TK ++ G
Sbjct: 339 FIKLFQLIYYLVVAILKNIVYFLWCVTKQVING 371


>AB020637-1|BAA74853.1|  523|Homo sapiens KIAA0830 protein protein.
          Length = 523

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 210 FLKLNSNIYW*IVTMLKNFI-FLGIATKNILFG 115
           F+KL   IY+ +V +LKN + FL   TK ++ G
Sbjct: 362 FIKLFQLIYYLVVAILKNIVYFLWCVTKQVING 394


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,283,699
Number of Sequences: 237096
Number of extensions: 944199
Number of successful extensions: 1484
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)