Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20m18
(586 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 44 1e-05
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 42 7e-05
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 41 1e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 41 1e-04
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 40 2e-04
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 38 8e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 38 8e-04
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 37 0.002
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 36 0.003
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 36 0.003
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 36 0.003
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 36 0.004
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 34 0.013
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 34 0.013
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 34 0.013
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 34 0.018
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 34 0.018
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 33 0.023
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 33 0.041
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 33 0.041
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 33 0.041
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 32 0.054
SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.054
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 32 0.054
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 31 0.12
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 31 0.12
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 31 0.12
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 30 0.22
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.22
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 30 0.29
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 29 0.38
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 0.66
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 29 0.66
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 1.2
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 1.5
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 2.0
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 27 2.7
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 26 4.7
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 4.7
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 6.2
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 25 6.2
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 25 6.2
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 25 8.1
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 25 8.1
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 44.4 bits (100), Expect = 1e-05
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHR 529
GH++ V+ H+ + +LSCS D+T IW Q+ N +IL GH+ V + +H
Sbjct: 93 GHMDYVRVCTFHH-EYPWILSCSDDQTIRIWNWQSR--NCIAILTGHSHYV--MCAAFHP 147
Query: 530 DRLTIYTASTDSTIRVWE 583
I +AS D T+RVW+
Sbjct: 148 SEDLIVSASLDQTVRVWD 165
Score = 35.9 bits (79), Expect = 0.004
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGCWNVTSILKGHTEGVTNIYGNYH 526
GH V W H +LS D+ +W + + W V + +GH V+ + H
Sbjct: 210 GHDRGVNWCAFHPTLPL-ILSAGDDRLVKLWRMTASKAWEVDTC-RGHFNNVSCCLFHPH 267
Query: 527 RDRLTIYTASTDSTIRVWE 583
++ I +AS D TIRVW+
Sbjct: 268 QE--LILSASEDKTIRVWD 284
Score = 25.0 bits (52), Expect = 8.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 448
GH N+V H Q +LS S DKT +W L
Sbjct: 254 GHFNNVSCCLFHPHQEL-ILSASEDKTIRVWDL 285
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 41.9 bits (94), Expect = 7e-05
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 212 VACNRKPEVVDWNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSV-KWIHNHN 388
V CNR P W+ + + YGA + V DP K+ +++ H+G +N V + N
Sbjct: 9 VGCNRIPTAATWSSNLGLIYGAERLIAVADP---FKEINYLMAGHSGRINCVCELATNSE 65
Query: 389 GQTTELLSCSVDKTAVIWTLQ 451
++ +LS + DKT +W L+
Sbjct: 66 YRSPFILSGASDKTLRLWQLE 86
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 431 AVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWER 586
AVI + WN +LKGH+ VT I + D I +A D + + E+
Sbjct: 558 AVIRLYETQSWNQQQVLKGHSLTVTTI--KFSPDDRYILSAGRDRLVCLHEQ 607
Score = 26.2 bits (55), Expect = 3.5
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -1
Query: 577 NSNGRISGRSVNSKSVS-MVISIYISNSFCMS--LENTGDVPATVL*CPDDSSLIN*ARE 407
++NG I+ S S++ VI +Y + S+ L+ T+ PDD +++ R+
Sbjct: 540 SNNGNIAATSCKSQTPEHAVIRLYETQSWNQQQVLKGHSLTVTTIKFSPDDRYILSAGRD 599
Query: 406 QLCCL 392
+L CL
Sbjct: 600 RLVCL 604
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 41.1 bits (92), Expect = 1e-04
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +2
Query: 302 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSIL 481
P+ TK +V +H +G ++SV + + HN L +CS DKT +W L+N + + L
Sbjct: 267 PDASTKPARSVHAH-SGPIHSVAF-NPHNDFI--LATCSTDKTIALWDLRNLNQRLHT-L 321
Query: 482 KGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
+GH + VT I + H + + + + S D VW+
Sbjct: 322 EGHEDIVTKISFSPHEEPI-LASTSADRRTLVWD 354
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 41.1 bits (92), Expect = 1e-04
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 329 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTN 508
T+ H+ G ++ VKW + L S S DKT IW + C LKGHT V++
Sbjct: 91 TLFGHYRG-ISQVKWATG----SKYLASASDDKTIRIWDFEKRC--SVRCLKGHTNYVSS 143
Query: 509 IYGNYHRDRLTIYTASTDSTIRVW 580
I +++ + + S D T+R+W
Sbjct: 144 I--DFNPLGTLLVSGSWDETVRIW 165
Score = 39.9 bits (89), Expect = 3e-04
Identities = 28/86 (32%), Positives = 43/86 (50%)
Frame = +2
Query: 326 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVT 505
V L HT +V+S+ + N T L+S S D+T IW LQ+G +L H+E +
Sbjct: 131 VRCLKGHTNYVSSIDF----NPLGTLLVSGSWDETVRIWNLQDG--TCLRMLPAHSEPII 184
Query: 506 NIYGNYHRDRLTIYTASTDSTIRVWE 583
++ + D TAS D R+W+
Sbjct: 185 SV--SISADGTLCATASYDGMARIWD 208
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHR 529
GH SV + + + + + S D T IW+ + + L GH G++ + +
Sbjct: 52 GHEKSVTCV-SVSPNKRWIATSSSDGTIKIWSALT--FRLECTLFGHYRGISQV--KWAT 106
Query: 530 DRLTIYTASTDSTIRVWE 583
+ +AS D TIR+W+
Sbjct: 107 GSKYLASASDDKTIRIWD 124
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 40.3 bits (90), Expect = 2e-04
Identities = 29/92 (31%), Positives = 47/92 (51%)
Frame = +2
Query: 305 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 484
N +T + +++L HT V + + +T L+S S D T +W G +T L+
Sbjct: 339 NYRTSECISILHGHTDSVLCLTF------DSTLLVSGSADCTVKLWHFSGGK-RIT--LR 389
Query: 485 GHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
GHT V ++ RDR + + S DSTI++W
Sbjct: 390 GHTGPVNSV--RIIRDRGLVLSGSDDSTIKIW 419
Score = 36.7 bits (81), Expect = 0.002
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 323 RVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGV 502
R VLS H+ V ++ + N L S S D T +W L + ++L+GH+ GV
Sbjct: 265 RQVVLSGHSDGVMCLQLVRNI------LASGSYDATIRLWNLAT--FQQVALLEGHSSGV 316
Query: 503 TNIYGNYHRDRLTIYTASTDSTIRVW 580
T + D+ + + S D TIR+W
Sbjct: 317 TCL----QFDQCKLISGSMDKTIRIW 338
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 38.3 bits (85), Expect = 8e-04
Identities = 26/94 (27%), Positives = 42/94 (44%)
Frame = +2
Query: 302 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSIL 481
PN++ + +L HT V + W H N L +CS+D + W L++ + V S
Sbjct: 309 PNDRAIE--FMLHGHTRAVTDMNW-HRQNPDV--LATCSIDSSVHCWDLRSPRFPVNSFY 363
Query: 482 KGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
H G T + NY I +S +R+W+
Sbjct: 364 DWH-NGATQVKWNYKNPH--ILASSHGRLVRIWD 394
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 38.3 bits (85), Expect = 8e-04
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHR 529
GH + V + + + +++S S DKT IW + C T GH++ V+ + + +
Sbjct: 103 GHTSDVLSV-SISPDNRQVVSGSRDKTIKIWNIIGNC-KYTITDGGHSDWVSCVRFSPNP 160
Query: 530 DRLTIYTASTDSTIRVWE 583
D LT +A D ++VW+
Sbjct: 161 DNLTFVSAGWDKAVKVWD 178
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 407 LSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
LS S DKT +W L+ G T GHT V ++ + D + + S D TI++W
Sbjct: 79 LSASWDKTIRLWDLEKG--ECTHQFVGHTSDVLSV--SISPDNRQVVSGSRDKTIKIW 132
Score = 29.1 bits (62), Expect = 0.50
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWN---VTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIR 574
LLS S DK+ ++W L N L GH+ V++ ++ D +AS D TIR
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF--DSHYALSASWDKTIR 88
Query: 575 VWE 583
+W+
Sbjct: 89 LWD 91
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 36.7 bits (81), Expect = 0.002
Identities = 30/116 (25%), Positives = 50/116 (43%)
Frame = +2
Query: 236 VVDWNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC 415
VV +N G A N VV N K+ + + H + + +++ +T+ SC
Sbjct: 19 VVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYD----STKFASC 74
Query: 416 SVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
DK +W + G V L GH + I Y+ D + + S DS +R+W+
Sbjct: 75 GGDKFIQVWDVNTG--KVDRRLGGHLAQINTI--RYNEDSSILASGSFDSKVRLWD 126
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 36.3 bits (80), Expect = 0.003
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +2
Query: 407 LSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
+S S+DK+ +W L G +L+GH VT + N ++RL + S DSTIR+W+
Sbjct: 563 ISGSMDKSIRVWDLSTGTCKY--VLEGHDAFVTLL--NVFQNRLI--SGSADSTIRIWD 615
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 479 LKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
L+GH EGV + H + T+ + S D T+RVW
Sbjct: 387 LEGHKEGVWAV--KIHEN--TLVSGSIDKTVRVW 416
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGH 490
GH V + H L+S S+DKT +W ++ T I +GH
Sbjct: 389 GHKEGVWAVKIHENT---LVSGSIDKTVRVWNIEKA--KCTHIFRGH 430
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 36.3 bits (80), Expect = 0.003
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +2
Query: 323 RVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGV 502
R +L H + +K+ NH+G L SC+ DK +W NG +GHT +
Sbjct: 2 RPIILQGHERPLTQIKY--NHDGDL--LFSCAKDKVINVWFSHNG--ERLGTYEGHTGAI 55
Query: 503 TNIYGNYHRDRLTIYTASTDSTIRVWE 583
+ ++ + + + D+T+R+W+
Sbjct: 56 WTC--DINKSSTLMVSGAADNTMRLWD 80
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
L +CS D T IW+ ++ + + L+GH V + + D + TAS+D R+WE
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDC--AFSADSTYLVTASSDHVARLWE 287
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 35.9 bits (79), Expect = 0.004
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +2
Query: 332 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNI 511
V+ H+ +N+V I+ N L + S DKT +W L+N + L+GH + V +
Sbjct: 276 VIQAHSKAINAVA-INPFNDYL--LATASADKTVALWDLRNP-YQRLHTLEGHEDEVYGL 331
Query: 512 YGNYHRDRLTIYTASTDSTIRVWE 583
+ H D + ++STD + +W+
Sbjct: 332 EWSPH-DEPILASSSTDRRVCIWD 354
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 34.3 bits (75), Expect = 0.013
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIY 514
L H+G V + W H G T L S S D ++W G W+ H V +
Sbjct: 49 LRGHSGPVWQLGWAHPKFG--TILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVS 106
Query: 515 GNYHRDRLTIYTASTDSTIRVWE 583
H + AS+D + V E
Sbjct: 107 WAPHEYGALLACASSDGKVSVLE 129
Score = 31.5 bits (68), Expect = 0.094
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
L +CS D+T +++++N + L+GH+ V + + + + +AS D + VW
Sbjct: 24 LATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVW 82
Score = 28.7 bits (61), Expect = 0.66
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGCWNVTSI 478
L+ H V W + T L S S DK IWT + +G W T +
Sbjct: 201 LAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPL 249
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 34.3 bits (75), Expect = 0.013
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Frame = +2
Query: 239 VDWNYDG-IICYGAC-NAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTE--- 403
V W D II G+ N + DP +K L HT + ++ W H +
Sbjct: 183 VAWAPDASIIATGSMDNTIRFWDP-KKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYL 241
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNI-YGNYHRDRLTIYTASTDSTIRVW 580
L S S D T IW ++ T L GHT +T + +G + IY++S D TIR+W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFT--LSGHTAPITCVRWGGQN----WIYSSSYDKTIRIW 295
Query: 581 E 583
+
Sbjct: 296 D 296
Score = 33.5 bits (73), Expect = 0.023
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
L+S S D ++W Q +T + GH + V + ++ D I TAS DS++R+W+
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITK-MHGHQKVVN--HASFSPDGRCIATASFDSSVRLWD 417
Score = 31.9 bits (69), Expect = 0.071
Identities = 24/99 (24%), Positives = 49/99 (49%)
Frame = +2
Query: 287 VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWN 466
+++ DP + TK +T + H VN + + +G+ + + S D + +W + G +
Sbjct: 370 LILWDPQKSTKP-ITKMHGHQKVVNHASF--SPDGRC--IATASFDSSVRLWDGKTGKFL 424
Query: 467 VTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
T L+GH V + D + ++S D+T++VW+
Sbjct: 425 AT--LRGHVAAVYQCA--WSTDSRLLVSSSQDTTLKVWD 459
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 34.3 bits (75), Expect = 0.013
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQ--NGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRV 577
++S S D TA +W L + +L+GH V ++ Y I TAS+D T+R
Sbjct: 316 IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV--QYSSKTGLIVTASSDRTLRT 373
Query: 578 WE 583
W+
Sbjct: 374 WD 375
Score = 28.3 bits (60), Expect = 0.87
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
++S S D+T +W + + + L GH+ V + ++ R R + + S+DSTI +W+
Sbjct: 234 MVSGSKDRTVSVWDVNSRF--ILYKLYGHSGSVLCL--DFCRRRNLLVSGSSDSTIIIWD 289
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 33.9 bits (74), Expect = 0.018
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 332 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNI 511
V+ H+ GH++ V + H L++ D A +W ++ NV +L GH V ++
Sbjct: 239 VIRHYHGHLSGVYALKLHPTLDV-LVTAGRDAVARVWDMRTR-QNV-HVLSGHKSTVASL 295
Query: 512 YGNYHRDRLTIYTASTDSTIRVWE 583
+ + T S DSTIR+W+
Sbjct: 296 AVQEFDPQ--VVTGSMDSTIRLWD 317
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 33.9 bits (74), Expect = 0.018
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +2
Query: 305 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 484
N T + V L HT +V + + LLS S D + ++W + + + L
Sbjct: 118 NVSTGECVETLIGHTDYVKCLLLLEEEG----LLLSGSTDASLIVWDVSSQPSRLLYKLT 173
Query: 485 GHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
GH+ G+ I + D +T ++S+IR W
Sbjct: 174 GHSRGIECITRQPNTD--IFWTCGSESSIRCW 203
Score = 31.5 bits (68), Expect = 0.094
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 422 DKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
D+ +W G NV I GH E VT I + + + ++S D TIRVW+
Sbjct: 285 DEEIRVWDTTTG--NVKDIYSGHYESVTKIL----QWKSYLISSSLDQTIRVWD 332
Score = 26.6 bits (56), Expect = 2.7
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHR 529
GH ++V + + L + S DKT W+L G T + H + T++
Sbjct: 220 GHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQGIHEETRM--EHPDVCTDVLTLADG 277
Query: 530 DRLTIYTASTDSTIRVWE 583
+ I TA D IRVW+
Sbjct: 278 N---IATACRDEEIRVWD 292
Score = 25.4 bits (53), Expect = 6.2
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +2
Query: 254 DGIICYGACNA-VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKT 430
+G++ G+ +A ++V D + + +L TGH ++ I T +C + +
Sbjct: 144 EGLLLSGSTDASLIVWDVSSQPS---RLLYKLTGHSRGIECI-TRQPNTDIFWTCGSESS 199
Query: 431 AVIW--TLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
W T G GH V + + +D ++TAS D T+R W
Sbjct: 200 IRCWHITKVGGSQLEEEGFWGHQSNVYCLLFD-PQDSEALWTASADKTVREW 250
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 33.5 bits (73), Expect = 0.023
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +2
Query: 242 DWN--YDGIICYGACNAVVVC--DPNEKTK----DRVTVLSHHTGHVNSVKWIHNHNGQT 397
DWN +D ++ G ++ ++ P + T + V ++ GH V + H
Sbjct: 88 DWNPFHDQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQYHPTAA 147
Query: 398 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRV 577
L S S D T +W + G +V+ + + + +++ D + T S D +RV
Sbjct: 148 NVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSM-----SFNADGTRLVTTSRDKKVRV 202
Query: 578 WE 583
W+
Sbjct: 203 WD 204
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 32.7 bits (71), Expect = 0.041
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 314 TKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHT 493
+KD + + + GH N+ W + + S D+TA +W +++ + GH
Sbjct: 431 SKDTKSTIVKYAGH-NAPIWDVQFSPFGYYFATASHDQTARLWDVEHAA--PLRVFVGHQ 487
Query: 494 EGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
V + ++H + + T S+D T R+W+
Sbjct: 488 NDVDCV--SFHPNAAYLATGSSDHTTRMWD 515
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 32.7 bits (71), Expect = 0.041
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
L++CS DK IW L G + + H + + + + D +T S D +R W+
Sbjct: 591 LVTCSADKNVKIWGLDFG--DCHKSIFAHQDSIMEV--TFQPDTYNFFTCSKDREVRYWD 646
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 32.7 bits (71), Expect = 0.041
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 317 KDRVTVLSHHTG--HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGH 490
+D VT+ H H ++V + G T E+ SCS D++ +W+L + T L GH
Sbjct: 235 RDSVTLEPQHCWKHHRDAVMGLAMRRG-TNEMFSCSADRSIKVWSLDQMSYIET--LFGH 291
Query: 491 TEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
+ + + R+R + D T R+W+
Sbjct: 292 QDVIFGV-DALARER-CVSVGGRDRTSRLWK 320
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 32.3 bits (70), Expect = 0.054
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 437 IWTLQNGCWNV---TSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
+W L+ G + V T I GH E VT+I + I T STD + +WE
Sbjct: 270 LWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWE 321
>SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 114
Score = 32.3 bits (70), Expect = 0.054
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 368 KWIHNHNGQTTELLSCSVDKTAVIWTLQNGC--WNVTSILKGHTEGVTNIYGNY 523
+W+ + + + ++C D IW GC W + + +G T +T I Y
Sbjct: 14 QWVETSSLELVDSVNCVADLCHAIWMFNGGCADWRLQILKEGFTVPMTGIISQY 67
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.3 bits (70), Expect = 0.054
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 344 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNY 523
+TGH + + I + + + +S S D TA + ++ L GH V + G +
Sbjct: 142 YTGHFDDIVSI-SWSADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVS--GFF 198
Query: 524 HRDRLTIYTASTDSTIRVWE 583
+D+ TIYT S D + VW+
Sbjct: 199 SKDQQTIYTVSKDGALFVWK 218
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 31.1 bits (67), Expect = 0.12
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 479 LKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
L GHT+ V +I D TI TAS+D+TI++W
Sbjct: 212 LVGHTDNVRDIL--ISDDGRTILTASSDATIKLW 243
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 31.1 bits (67), Expect = 0.12
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHR 529
GH+++V +I + LLSCS DK+ ++W G L+ + G + +
Sbjct: 253 GHIDTVAYIR-WSPDDRYLLSCSCDKSVILWDAFTG-----EKLRDYKHGFSVSCCCWLP 306
Query: 530 DRLTIYTASTDSTIRVW 580
D L+ T S D I W
Sbjct: 307 DGLSFITGSPDCHITHW 323
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 31.1 bits (67), Expect = 0.12
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ---NGCWNVTSILKGHTEGVT 505
L H G VN+VKW+ G ++L +C D +W L N T + G T G+T
Sbjct: 311 LRGHKGDVNAVKWM---PGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMT 367
Query: 506 NIYGNY 523
Y
Sbjct: 368 GSTSEY 373
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 30.3 bits (65), Expect = 0.22
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 344 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW-TLQNGCWNVTSILKGHTEGVTNIYGN 520
HT + + W N+ LLS S+DKTA +W ++ C H++ VT+I +
Sbjct: 308 HTADILDLSWSRNNF-----LLSSSMDKTARLWHPVRKDCLCCFE----HSDFVTSIAFH 358
Query: 521 YHRDRLTIYTASTDSTIRVW 580
DR + + S D +R+W
Sbjct: 359 PKDDRFFL-SGSLDCKLRLW 377
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 30.3 bits (65), Expect = 0.22
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 464 NVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVWE 583
N+ + H+E +T++ ++ T+ TASTD T++VW+
Sbjct: 323 NLVKQFQAHSEYITSL--DFSHPFGTLATASTDKTVKVWD 360
Score = 29.9 bits (64), Expect = 0.29
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +2
Query: 344 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNY 523
H+ ++ S+ + H L + S DKT +W + + LKGH++ V+ +
Sbjct: 331 HSEYITSLDFSHPFG----TLATASTDKTVKVWDMAGVVY--LGSLKGHSDYVSCLA--- 381
Query: 524 HRDRLTIYTASTDSTIRVW 580
+D I T S D+T+R+W
Sbjct: 382 IQDSF-IATGSMDTTVRLW 399
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 29.9 bits (64), Expect = 0.29
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNI-YGNYHRDRLTIYTASTDSTIRVW 580
LLSCS D +A +W++ V KGHT V ++ +G + TAS D T ++W
Sbjct: 394 LLSCSEDASARLWSVDTKTALVA--YKGHTGPVWDVAFGPFGH---YFATASHDQTAQLW 448
Score = 25.4 bits (53), Expect = 6.2
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Frame = +2
Query: 344 HTGHVNSVKWIHNHNGQTTELL-------SCSVDKTAVIWTLQNGCWNVTSILKGHTEGV 502
H GH SV+ + H T + S D +I G ++GH +
Sbjct: 493 HRGH--SVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNI 550
Query: 503 TNIYGNYHRDRLTIYTASTDSTIRVWE 583
++ ++ R+ + + +D T+R W+
Sbjct: 551 YSL--SFSRESTVLVSGGSDCTVRAWD 575
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 29.5 bits (63), Expect = 0.38
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIY---GNYHRDRLTIYTASTDSTIR 574
L+S VD+ + T N S GH + ++ G RL YTAS D+TIR
Sbjct: 146 LISTLVDQNSTFET-SNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRL--YTASEDNTIR 202
Query: 575 VWE 583
+W+
Sbjct: 203 IWD 205
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 28.7 bits (61), Expect = 0.66
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 519 FPYILVTPSVCPLRILVTFQQPFCNVQMTAVLSTEQE 409
F LV+P +C L ++ FQ+ F V++ + +QE
Sbjct: 1062 FSLFLVSPLICALATMLAFQKFFYQVRLNKGIEKKQE 1098
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 28.7 bits (61), Expect = 0.66
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 398 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTIRV 577
T LS S DKT +W L G V L GH + V + + D TIR+
Sbjct: 137 TTFLSGSDDKTVKVWDLSTGA--VQYDLSGHEDYVRTA---SWMSATRLVSGGYDGTIRL 191
Query: 578 WE 583
W+
Sbjct: 192 WD 193
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 311 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGH 490
KT + L H G V W + G T L++ S D+T +W L+ G + GH
Sbjct: 434 KTGVLIRSLEEHEGDV----WTFEYVGDT--LVTGSTDRTVRVWDLRTG--ECKQVFYGH 485
Query: 491 TEGV 502
T +
Sbjct: 486 TSTI 489
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 539 TIYTASTDSTIRVWE 583
T+ T STD T+RVW+
Sbjct: 458 TLVTGSTDRTVRVWD 472
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.5 bits (58), Expect = 1.5
Identities = 25/79 (31%), Positives = 35/79 (44%)
Frame = +2
Query: 329 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTN 508
T++ GH SV I + ++ LLS S+DKT +W LQ S +K EG+
Sbjct: 475 TLVERLEGHKESVYSIA-FSPDSSILLSGSLDKTIKVWELQATRSVGLSAIK--PEGICK 531
Query: 509 IYGNYHRDRLTIYTASTDS 565
H D + S DS
Sbjct: 532 ATYTGHTDFVLSVAVSPDS 550
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 353 HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 451
H +SVK ++ N L+SCS D + + W ++
Sbjct: 227 HSHSVKQVNFCNDSPYNLVSCSRDGSIIFWDMR 259
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 496 FCMSLENTGDVPATVL*CPDDSSLIN*AREQLCCLAIMIVYPFYRVYVSCMVTQY 332
F ++ E+TG + C + S N E L L ++ +PFYR + +V QY
Sbjct: 252 FLIANESTGHLMKNH--CRNSSPHDNPILEYLFALVSLLAWPFYRRKLDSLVYQY 304
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 4.7
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN-----GCWNVTSILKGHTEG 499
LS HTG+V +V W + L S S D T +W ++ C ++ + +
Sbjct: 185 LSGHTGNVLAVDWCPKNE---FVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQT 241
Query: 500 VTNIYGN-----YHRDRLTIYTASTDSTIRVW 580
+ YG + D + + TD IRVW
Sbjct: 242 NISHYGTVNGLAWTSDARYLASCGTDDRIRVW 273
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 305 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG 457
N+ T +SH+ G VN + W L SC D +W +++G
Sbjct: 233 NKYLPSNQTNISHY-GTVNGLAW----TSDARYLASCGTDDRIRVWNMESG 278
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +2
Query: 392 QTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDSTI 571
+T L C+ K A++ +++ N S H++ V + G++H + + T D+T
Sbjct: 270 ETPLALVCTDSKDAMLIDIRS---NSVSAKLPHSDSV--LTGSWHPNGNILATGGQDTTA 324
Query: 572 RVWE 583
+VW+
Sbjct: 325 KVWD 328
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 488 HTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
H+E +T++ D T TAS D T+R+W
Sbjct: 2295 HSEKITHVVAC---DERTFLTASLDLTLRLW 2322
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 6.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 272 GACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 451
GA V V D KT D+V + H G + S+ W + +++ ++ S + IW
Sbjct: 208 GADGKVYVFDG--KTGDQVYEIDAHKGSIFSISW----SPDSSQFVTSSAGYSCKIWDAN 261
Query: 452 NG 457
G
Sbjct: 262 TG 263
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 482 KGHTEGVTNIYGNYHRDRLTIYTASTDSTIRVW 580
+GH + +I+ H D I T D TIR+W
Sbjct: 15 RGHRLSIFSIH--IHPDGSRIATGGLDGTIRIW 45
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 8.1
Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +2
Query: 221 NRKPEVVDWNYDGIICYGACNA----VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHN 388
N K V+ + G Y A + + + D ++T+ + L+ V ++WI
Sbjct: 303 NNKGPVLSLKWSGTDTYLAAGSADGTITLFDQLKQTQYSIDTLA---SSVLDIEWI---- 355
Query: 389 GQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTEGVTNIYGNYHRDRLTIYTASTDST 568
E ++ V+ + ++ + +G V+++ H + + Y+ + TAS+D+T
Sbjct: 356 -SFDEFVTSDVEGSLRVYKV-DGKAPVSTVSHAHDNSIVAL--RYNLRISLLLTASSDTT 411
Query: 569 IRVWER 586
+++W R
Sbjct: 412 VKLWSR 417
>SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1466
Score = 25.0 bits (52), Expect = 8.1
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 122 RVHDFFEN*IYLKKVFCGTMKVSVEQVYTSVACNRKPEVVDWNYDGIICYGACNAVVVCD 301
R+ F+ I+ KK G+ + E+V + C R D+NY + G C V
Sbjct: 1245 RISSFYRKSIH-KKCRVGSSLLVKEEVLSKCECTRADFECDYNYRR-LKDGTCVLVSGLQ 1302
Query: 302 PNEKTKDRVTV 334
P + +++ +V
Sbjct: 1303 PPDTREEQCSV 1313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,173,006
Number of Sequences: 5004
Number of extensions: 43996
Number of successful extensions: 230
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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