Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20m17
         (297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   3.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   5.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   9.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 111 TVQVVIRPFNDKQEFNLKTSYLVSQIHVIQCTE 209
           T Q + +PF   + FN+ T+  +  IH I   E
Sbjct: 88  TTQEINKPFKRLELFNITTT-TIHSIHSIDGDE 119


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 158 IKFLFVIERSNDYLN 114
           I  LFV +  NDY+N
Sbjct: 116 ISDLFVFDDLNDYIN 130


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 71  TVNYYSFFFVFLYVC 27
           +V+ Y+F  +F Y+C
Sbjct: 773 SVDVYAFGILFWYLC 787


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 71  TVNYYSFFFVFLYVC 27
           +V+ Y+F  +F Y+C
Sbjct: 811 SVDVYAFGILFWYLC 825


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,629
Number of Sequences: 438
Number of extensions: 1193
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)