Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20m16
         (634 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014297-1|AAH14297.1|  566|Homo sapiens F-box and WD repeat dom...    30   7.8  
BC014130-1|AAH14130.1|  566|Homo sapiens F-box and WD repeat dom...    30   7.8  
AL807752-5|CAI12746.1|  129|Homo sapiens F-box and WD repeat dom...    30   7.8  
AL807752-4|CAI12744.1|  200|Homo sapiens F-box and WD repeat dom...    30   7.8  
AL807752-3|CAI12743.1|  566|Homo sapiens F-box and WD repeat dom...    30   7.8  
AK026081-1|BAB15354.1|  566|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>BC014297-1|AAH14297.1|  566|Homo sapiens F-box and WD repeat domain
           containing 5 protein.
          Length = 566

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 491 WFQDFERQFDYLKCQEMALLRNH 423
           W+++F+R +D + C E+  LR H
Sbjct: 69  WYEEFQRLYDTVPCVEVQTLREH 91


>BC014130-1|AAH14130.1|  566|Homo sapiens F-box and WD repeat domain
           containing 5 protein.
          Length = 566

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 491 WFQDFERQFDYLKCQEMALLRNH 423
           W+++F+R +D + C E+  LR H
Sbjct: 69  WYEEFQRLYDTVPCVEVQTLREH 91


>AL807752-5|CAI12746.1|  129|Homo sapiens F-box and WD repeat domain
           containing 5 protein.
          Length = 129

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 491 WFQDFERQFDYLKCQEMALLRNH 423
           W+++F+R +D + C E+  LR H
Sbjct: 69  WYEEFQRLYDTVPCVEVQTLREH 91


>AL807752-4|CAI12744.1|  200|Homo sapiens F-box and WD repeat domain
           containing 5 protein.
          Length = 200

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 491 WFQDFERQFDYLKCQEMALLRNH 423
           W+++F+R +D + C E+  LR H
Sbjct: 69  WYEEFQRLYDTVPCVEVQTLREH 91


>AL807752-3|CAI12743.1|  566|Homo sapiens F-box and WD repeat domain
           containing 5 protein.
          Length = 566

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 491 WFQDFERQFDYLKCQEMALLRNH 423
           W+++F+R +D + C E+  LR H
Sbjct: 69  WYEEFQRLYDTVPCVEVQTLREH 91


>AK026081-1|BAB15354.1|  566|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22428 fis, clone HRC09055. ).
          Length = 566

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 491 WFQDFERQFDYLKCQEMALLRNH 423
           W+++F+R +D + C E+  LR H
Sbjct: 69  WYEEFQRLYDTVPCVEVQTLREH 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,776,343
Number of Sequences: 237096
Number of extensions: 1793101
Number of successful extensions: 2483
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2483
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)