Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l20
         (355 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.46 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   2.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   5.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   5.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   9.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   9.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 0.46
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 38  REMLWQVLPTFVIFGVQFLTG 100
           R+ L+ VLP  VI+ V F+TG
Sbjct: 47  RDPLYIVLPITVIYAVIFVTG 67


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 73 YECWQNLPKHFSDK 32
          + C+ +L +HF DK
Sbjct: 15 FSCYYSLKRHFQDK 28


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 137  FFESGHHQVGRGNLSKIGPQI 75
            F+ +G  +VG G  SK+  Q+
Sbjct: 1287 FWVTGSTRVGEGQSSKVAAQV 1307


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 137  FFESGHHQVGRGNLSKIGPQI 75
            F+ +G  +VG G  SK+  Q+
Sbjct: 1283 FWVTGSTRVGEGQSSKVAAQV 1303


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -1

Query: 151 FMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHF 41
           F F++  +L  +   + +    DP +Y  +QN+  +F
Sbjct: 395 FDFQNKNNLIPSALQSYSTSMRDPAFYMLYQNILSYF 431


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 79  WGPIFDRFPRPTW*WP 126
           W P+ D  P  TW  P
Sbjct: 530 WNPLTDTVPIHTWIHP 545


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 304 KY-NKSSCSNRYLHQYKNEI*HKFKKI 227
           KY N ++ +N Y + Y N   + +KK+
Sbjct: 90  KYSNYNNYNNNYNNNYNNNYNNNYKKL 116


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 304 KY-NKSSCSNRYLHQYKNEI*HKFKKI 227
           KY N ++ +N Y + Y N   + +KK+
Sbjct: 90  KYSNYNNYNNNYNNNYNNNYNNNYKKL 116


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 120 SPSGARKPVKNWTPN 76
           SPSG  K V  + PN
Sbjct: 86  SPSGQNKAVAPYPPN 100


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 120 SPSGARKPVKNWTPN 76
           SPSG  K V  + PN
Sbjct: 86  SPSGQNKAVAPYPPN 100


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 79  KYYECWQNLPKHF 41
           KYYE   N+P +F
Sbjct: 309 KYYEVGSNVPFNF 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,300
Number of Sequences: 438
Number of extensions: 2223
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)