Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l18
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.78 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   3.1  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   4.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   4.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   4.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.6  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   9.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 501  PPVAIAISLRVDLRLSPKPGAFTAATCKPI-FNLLTTKVDSASPSTSSATMIR 346
            PP  +A +      L P P A ++A  +P   ++ +T V S + S+SS+T  R
Sbjct: 928  PPQVVAAAPTQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSSSTADR 980


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 615 ARVRNQTLTGVLNRLETKFRRQTLNMKKKN 704
           A+  N+T  G++ RLE + +   L M+  N
Sbjct: 78  AKADNETTVGIVKRLEEQIQLLRLQMEASN 107


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 77  AIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIE 181
           AIG+       K+   GV+T + GK  +D+LE+ E
Sbjct: 317 AIGRQAETGTLKLANAGVVTAEGGK--SDKLEVDE 349


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 77  AIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIE 181
           AIG+       K+   GV+T + GK  +D+LE+ E
Sbjct: 293 AIGRQAETGTLKLANAGVVTAEGGK--SDKLEVDE 325


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 77  AIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIE 181
           AIG+       K+   GV+T + GK  +D+LE+ E
Sbjct: 290 AIGRQAETGTLKLANAGVVTAEGGK--SDKLEVDE 322


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 20  VTTPEEIAQVATISANG 70
           V TPEE+ Q  T++ +G
Sbjct: 256 VATPEELTQAITVACDG 272


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 134 TVKDGKTLTDELEIIEGMKFDRGYISPYFINSSKG 238
           TVKD   L DE + I   KFD   I+     ++KG
Sbjct: 219 TVKDFLPLDDEYDRIMFAKFDDANINDLLHFTTKG 253


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 120 GME*SQ*KMEKPSPTSLKSLRV*NLIEVTFHHTSLILLK 236
           G + S  + E P P+S  ++R    +EVTF   + +  K
Sbjct: 209 GTQHSDQQQEPPRPSSPPAIRRSGTLEVTFSERTFVTPK 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,152
Number of Sequences: 2352
Number of extensions: 12900
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)