Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20l18
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 348 3e-96
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 332 1e-91
AJ270981-1|CAB65903.1| 223|Caenorhabditis elegans heat shock pr... 204 4e-53
AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical ... 31 0.83
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 29 2.5
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 28 5.9
Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 348 bits (855), Expect = 3e-96
Identities = 167/240 (69%), Positives = 199/240 (82%)
Frame = +2
Query: 2 KGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIE 181
K +SK VTTPEEIAQVATISANGDT +G LI+DAMKKVG GVITVKDGKTL DELE+IE
Sbjct: 147 KKISKKVTTPEEIAQVATISANGDTVVGNLISDAMKKVGTTGVITVKDGKTLNDELELIE 206
Query: 182 GMKFDRGYISPYFINSSKGAKVEFQDALVLFSEKKISNVQTIIPALEMANQQRKPLIIVA 361
GMKFDRGYISPYFI S+KGAKVE++ ALVL SEKKIS VQ I+PALE+AN+ R+PL+I+A
Sbjct: 207 GMKFDRGYISPYFITSAKGAKVEYEKALVLLSEKKISQVQDIVPALELANKLRRPLVIIA 266
Query: 362 EDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLSDMAIATGGVVFGDDANLIKIE 541
EDVDGEAL+TLV+NRLK+GLQV A+KAPGFGDNRK+TL DM IATG +FGDD+NLIKIE
Sbjct: 267 EDVDGEALTTLVLNRLKVGLQVVAIKAPGFGDNRKNTLKDMGIATGATIFGDDSNLIKIE 326
Query: 542 DVQPSDLGQVGEVIIXXXXXXXXXXXXXXSDIDRRAEQIRDQIQETNSEYEKEKLQERLA 721
D+ +DLG+V EV I ++I++R E I D+I+++ S+YEKEKL ERLA
Sbjct: 327 DITANDLGEVDEVTITKDDTLLLRGRGDQTEIEKRIEHITDEIEQSTSDYEKEKLNERLA 386
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 332 bits (816), Expect = 1e-91
Identities = 159/240 (66%), Positives = 195/240 (81%)
Frame = +2
Query: 2 KGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIE 181
K +SK VTTPEEIAQVATISANGDT +G LI+DAMKKVG GVITVKDGKTL D+LE+IE
Sbjct: 147 KKISKKVTTPEEIAQVATISANGDTVVGNLISDAMKKVGTTGVITVKDGKTLNDQLELIE 206
Query: 182 GMKFDRGYISPYFINSSKGAKVEFQDALVLFSEKKISNVQTIIPALEMANQQRKPLIIVA 361
GMKFDRGYISPYFI S+KGAKVE++ ALVL SEKKIS VQ I+PALE+AN+ R+PL+I+A
Sbjct: 207 GMKFDRGYISPYFITSAKGAKVEYEKALVLLSEKKISQVQDIVPALELANKLRRPLVIIA 266
Query: 362 EDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLSDMAIATGGVVFGDDANLIKIE 541
EDVDGEAL+TLV+NRLK+GLQV A+KAPGFGDNRK+ L DM IATG +FGD+ +++E
Sbjct: 267 EDVDGEALTTLVLNRLKVGLQVVAIKAPGFGDNRKNALKDMGIATGASIFGDETLDLRLE 326
Query: 542 DVQPSDLGQVGEVIIXXXXXXXXXXXXXXSDIDRRAEQIRDQIQETNSEYEKEKLQERLA 721
D+ +DLG+V EV I ++I++R E+I D+I+ + S+YEKEKL ERLA
Sbjct: 327 DITANDLGEVDEVTITKDDTLLLRGRGDQTEIEKRIEEITDEIERSTSDYEKEKLNERLA 386
>AJ270981-1|CAB65903.1| 223|Caenorhabditis elegans heat shock
protein 60 protein.
Length = 223
Score = 204 bits (499), Expect = 4e-53
Identities = 97/154 (62%), Positives = 122/154 (79%)
Frame = +2
Query: 260 ALVLFSEKKISNVQTIIPALEMANQQRKPLIIVAEDVDGEALSTLVVNRLKIGLQVAAVK 439
ALVL SEKKIS VQ I+PALE+AN+ R+PL+I+AEDVDGEAL+TLV+NRLK+GLQV A+K
Sbjct: 2 ALVLLSEKKISQVQDIVPALELANKLRRPLVIIAEDVDGEALTTLVLNRLKVGLQVVAIK 61
Query: 440 APGFGDNRKSTLSDMAIATGGVVFGDDANLIKIEDVQPSDLGQVGEVIIXXXXXXXXXXX 619
APGFGDNRK+TL DM IATG +FGDD+NLIKIED+ +DLG+V EV I
Sbjct: 62 APGFGDNRKNTLKDMGIATGATIFGDDSNLIKIEDITANDLGEVDEVTITKDDTLLLRGR 121
Query: 620 XXXSDIDRRAEQIRDQIQETNSEYEKEKLQERLA 721
++I++R E I D+I+++ S+YEKEKL ERLA
Sbjct: 122 GDQTEIEKRIEHITDEIEQSTSDYEKEKLNERLA 155
>AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical
protein Y50E8A.7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 352 DQRLPLLISHF*CWNDRLNIANFFLGEEYQGILEFDFGTFRRI 224
D R+P+++SHF LN+ ++ +Y + D GT R +
Sbjct: 270 DSRIPIILSHFPSATSTLNLLHWMQIFKYHELRRLDLGTARNL 312
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 425 VAAVKAPGFGDNRKSTLSDMAIATGGVVFGDDANL 529
VA VK+P +TL++ A ATG V+ G+DA L
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQL 36
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +2
Query: 11 SKPVTTPEEIAQVATISANGDTAIGKLIAD-AMKKVGRDGVITVKDGKTLTDELEIIEGM 187
SKP+ TP+ + + A K AD A +K R+ G+ ++ E +
Sbjct: 113 SKPIKTPKPTPEKKNTPSKAKLAAMKKKADAARRKAQREAKKLEALGEKQEEDDEDPDD- 171
Query: 188 KFDRGYISPYFINSSKGAKVEFQDALVLFSEKKISNVQTIIPALEMANQQRKPLI 352
F + + K E +++ + +E ++ ++ T+ P++E + Q P+I
Sbjct: 172 SFAMPILESSVDTPGEAPKEEIEESTIPAAELEMEDLTTVAPSIEETSGQAPPVI 226
>U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical
protein F52E1.5 protein.
Length = 248
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 456 SPKPGAFTAATCKPIFNLLTTKVDSASPSTSSATM 352
SPKP T T + TT +A+PST+++T+
Sbjct: 80 SPKPITTTETTTRSTTTTTTTTTTTAAPSTTTSTV 114
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 71 DTAIGKLIADAMKKVGRDGVITVKDGKTLTDELEIIEGMKFDRGYISPY 217
DT IG L+ + +G G + + + + D E+++G+KF Y SP+
Sbjct: 496 DTLIGVLVFATI--IGGVGSVVTQMSQNVNDFREMMDGIKFYMKYRSPF 542
>Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical
protein C41C4.10 protein.
Length = 331
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 711 SCNFSFSYSEFVS*IWSLICSARLSMSDFLPLPFNSRVSSLVII 580
+C+ S + F+ SL + R+ + F+PLP S SSL +I
Sbjct: 164 ACSISGGLTYFIKKASSLPPTTRIIIQRFVPLPATSLASSLNVI 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,523
Number of Sequences: 27780
Number of extensions: 325234
Number of successful extensions: 923
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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