Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l16
         (608 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB1B4 Cluster: SET domain containing protein; n...    33   5.3  
UniRef50_Q4V8V5 Cluster: Zgc:114123; n=5; Danio rerio|Rep: Zgc:1...    33   5.3  
UniRef50_Q8LWF1 Cluster: Cytochrome c oxidase subunit 2; n=8; Bi...    33   7.0  
UniRef50_A6RCI4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  

>UniRef50_UPI00006CB1B4 Cluster: SET domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: SET domain containing
           protein - Tetrahymena thermophila SB210
          Length = 869

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 472 GCKSVKNIICDLQQCACFIQNFICNPYH 389
           GCK +K   C  ++CACF+    C+P H
Sbjct: 566 GCKCIKGQ-CKTKKCACFLMGMECDPEH 592


>UniRef50_Q4V8V5 Cluster: Zgc:114123; n=5; Danio rerio|Rep:
           Zgc:114123 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 555

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 235 VCGICCLIIEMFFRRHKFC*NHRLIFCHGCCLS*RI---HFISL*LFNYK 95
           VC  CC +  ++F  H  C   R + C GCC+  R+   H ++L L  +K
Sbjct: 427 VCS-CCAMRSLYFTWHNVCSVCRRVVCPGCCVEMRLPSQHCVNLPLSFFK 475


>UniRef50_Q8LWF1 Cluster: Cytochrome c oxidase subunit 2; n=8;
           Bilateria|Rep: Cytochrome c oxidase subunit 2 -
           Lampsilis teres
          Length = 281

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 242 IYCLWHLLPYY*NVFSPPQVLLESSSHLLSWVLPFLKNSFYF 117
           +Y +W    +   ++SP + L+ES+S+L SWVL    +  Y+
Sbjct: 139 LYLMWWCFFFKVAIYSPTKFLVESASNLSSWVLSVSYSVLYW 180


>UniRef50_A6RCI4 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 921

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 313 IAASTKMGKLKERYGNIRNNLSKAGG 390
           +AA ++  +L +RY NIRN + KAGG
Sbjct: 774 VAAESRQRQLVDRYNNIRNKIVKAGG 799


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,149,667
Number of Sequences: 1657284
Number of extensions: 10377862
Number of successful extensions: 21247
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21222
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)