Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l15
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.7  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   3.7  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   3.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 505 LARSLFNASVTPQERNEQEIPE 570
           +A+ L+N S  P  + E+E+ E
Sbjct: 298 MAQGLYNHSTIPLTKEEEELQE 319


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 488 VFQSVLTSPIVRTPSF 441
           VFQ + +SP  R+P+F
Sbjct: 23  VFQEITSSPAGRSPAF 38


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 488 VFQSVLTSPIVRTPSF 441
           VFQ + +SP  R+P+F
Sbjct: 23  VFQEITSSPAGRSPAF 38


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 488 VFQSVLTSPIVRTPSF 441
           VFQ + +SP  R+P+F
Sbjct: 23  VFQEITSSPAGRSPAF 38


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 595 VVMKYTSRTLVFLVHFF 545
           ++ +Y S  LVFL +FF
Sbjct: 72  ILQRYCSVLLVFLTYFF 88


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 595 VVMKYTSRTLVFLVHFF 545
           ++ +Y S  LVFL +FF
Sbjct: 68  ILQRYCSVLLVFLTYFF 84


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 67  WSVWLLTFLWLRSNV 111
           W VWLL+  W+  ++
Sbjct: 221 WLVWLLSQAWISVHI 235


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 67  WSVWLLTFLWLRSNV 111
           W VWLL+  W+  ++
Sbjct: 454 WLVWLLSQAWISVHI 468


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 67  WSVWLLTFLWLRSNV 111
           W VWLL+  W+  ++
Sbjct: 454 WLVWLLSQAWISVHI 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,635
Number of Sequences: 336
Number of extensions: 3330
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)