Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20l13
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 212 2e-55
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 210 7e-55
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 206 1e-53
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 145 3e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 113 8e-26
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 113 1e-25
03_01_0034 + 318432-318825,318902-319851 113 1e-25
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 113 1e-25
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 112 2e-25
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 112 3e-25
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 112 3e-25
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 112 3e-25
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 94 9e-20
03_05_0433 - 24245560-24245946 31 0.75
07_01_0317 + 2229894-2230137,2231142-2231233,2231327-2231364,223... 30 1.3
10_01_0340 - 3734116-3734178,3734212-3734300,3734785-3734844,373... 29 3.0
08_02_1088 + 24247781-24249043 29 3.0
05_01_0299 - 2322204-2322734,2324089-2326164 29 4.0
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743... 29 4.0
09_06_0262 - 21921647-21922796,21922897-21923423 28 5.3
09_01_0046 + 820503-820795,821734-821914 28 5.3
01_01_0834 + 6522709-6523452 28 5.3
07_03_1310 - 25673140-25673418,25673837-25674082,25674189-256744... 28 7.0
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 212 bits (518), Expect = 2e-55
Identities = 97/159 (61%), Positives = 118/159 (74%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRECIS+H+GQAG+Q+G ACW+LYCLEHGI+PDG +P +T D FNTFFSE G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKT-VGGGDDAFNTFFSETGAG 59
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
K VPR V VDLE TVIDEVR+G+YRQL+HPEQLI+GKEDAANN+ARGHY+ G+E++ +
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 622
+RIRKLAD CTGLQ LL+E+LS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 210 bits (513), Expect = 7e-55
Identities = 95/159 (59%), Positives = 117/159 (73%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE IS+H+GQAG+Q+G ACW+LYCLEHGI PDGT+P+ +T A FNTFFSE G
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPS-DTTVGVAHDAFNTFFSETGAG 59
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
K VPR + VDLE TVIDEVR+G YRQL+HPEQLI+GKEDAANN+ARGHY+ G+E++ +
Sbjct: 60 KHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 622
+R+RKLAD CTGLQ LL+E+LS
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 206 bits (503), Expect = 1e-53
Identities = 96/159 (60%), Positives = 115/159 (72%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRECIS+H+GQAG+Q+G ACW+LYCLEHGI+ DG +P+ T D FNTFFSE G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRT-VGGGDDAFNTFFSETGAG 59
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
K VPR V VDLE TVIDEVR+G YRQL+HPEQLI GKEDAANN+ARGHY+ G+E++ +
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 622
+RIRKLAD CTGLQ LL+E+LS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 145 bits (351), Expect = 3e-35
Identities = 70/125 (56%), Positives = 84/125 (67%)
Frame = +2
Query: 248 TLPACETDPNTADSCFNTFFSEADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLI 427
TL +T P A FNTFFSE GK VPR + VDLE TVIDEV++G YRQL+HPEQLI
Sbjct: 94 TLACSDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLI 153
Query: 428 TGKEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLL 607
+ KEDAANN+ARGHY+ GREV+ ++R+RKLAD CTGLQ LL
Sbjct: 154 SYKEDAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 213
Query: 608 MEKLS 622
+E+LS
Sbjct: 214 LERLS 218
Score = 71.3 bits (167), Expect = 6e-13
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLP 256
MRE IS+H+GQAG+Q+G +CW+LYCLEHGI+PDG +P
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMP 37
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 113 bits (273), Expect = 8e-26
Identities = 56/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHGI G D + N +++EA G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSG---DSDLQLERINVYYNEASGG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VRSG Y Q++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 628
+ +RK A+ C LQ LL+ K+ +E
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 113 bits (272), Expect = 1e-25
Identities = 52/134 (38%), Positives = 80/134 (59%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHG+ P GT T P + N +F+EA G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLER-INVYFNEASGG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D +RSG ++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 506 ERIRKLADQCTGLQ 547
+ +RK A+ C LQ
Sbjct: 118 DVVRKEAENCDCLQ 131
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 113 bits (272), Expect = 1e-25
Identities = 55/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHGI G + D + N +++EA G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRY---DGDSDLQLERVNVYYNEASCG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VRSG Y ++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 628
+ +RK A+ C LQ LL+ K+ +E
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 113 bits (271), Expect = 1e-25
Identities = 57/161 (35%), Positives = 88/161 (54%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHGI P G A +D N +++EA G
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-AGTSDLQLER--VNVYYNEASCG 237
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VR+G Y Q++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 238 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 297
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 628
+ +RK A+ C LQ LL+ K+ +E
Sbjct: 298 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 338
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 112 bits (270), Expect = 2e-25
Identities = 55/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHGI G D + N +++EA G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSG---DSDLQLERINVYYNEASGG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VRSG + Q++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 628
+ +RK A+ C LQ LL+ K+ +E
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 112 bits (269), Expect = 3e-25
Identities = 54/161 (33%), Positives = 86/161 (53%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHG+ G D + N +++EA G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAG---DSDLQLERINVYYNEASGG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VRSG + Q++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 628
+ +RK A+ C LQ LL+ K+ +E
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 112 bits (269), Expect = 3e-25
Identities = 51/134 (38%), Positives = 80/134 (59%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHGI P G + + N +++EA G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTG---NSDLQLERVNVYYNEASCG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VR+G Y Q++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 506 ERIRKLADQCTGLQ 547
+ +RK A+ C LQ
Sbjct: 118 DVVRKEAENCDCLQ 131
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 112 bits (269), Expect = 3e-25
Identities = 55/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 146 MRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 325
MRE + + GQ G Q+G W++ C EHGI P G + N +++EA G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTS---DLQLERVNVYYNEASCG 57
Query: 326 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 505
+ VPR V++DLE +D VR+G Y Q++ P+ + G+ A NN+A+GHY+ G E++ V+
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 506 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 628
+ +RK A+ C LQ LL+ K+ +E
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 93.9 bits (223), Expect = 9e-20
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Frame = +2
Query: 149 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 328
RE I++ VGQ G Q+G+ W+ CLEHGI DG L T + FF +AD
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRK---DVFFYQADDQH 59
Query: 329 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKE--DAANNYARGHYSTGREVLSPV 502
+PR ++VDLE VI+ +++ EYR LY+ E + + A NN+A G Y G +V+ +
Sbjct: 60 YIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDI 118
Query: 503 MERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSD 625
M+ I + AD L+ L+E L+D
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLND 159
>03_05_0433 - 24245560-24245946
Length = 128
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Frame = +3
Query: 207 GSYTAWSTGSDL----TEPCPLVKLILIQRIPASIRFFLRL-IEGR 329
GS+ A S+ +L TE CPL +L+ R P+ +RFF+ L ++G+
Sbjct: 76 GSFPAVSSAYELFFMATEICPLGELVRHSRAPSRVRFFMWLALQGK 121
>07_01_0317 +
2229894-2230137,2231142-2231233,2231327-2231364,
2231695-2231717,2232026-2232132,2232208-2232370,
2232581-2232663,2232775-2232837,2233049-2233072,
2233119-2233304
Length = 340
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 194 PSGPRLGPRVRICTPSYL-KLEILVNPI 114
P+ P GPR RI TP +L KL+ L+N I
Sbjct: 231 PNNPPTGPRGRIYTPEFLTKLQPLINRI 258
>10_01_0340 -
3734116-3734178,3734212-3734300,3734785-3734844,
3736188-3736245,3736507-3736893,3736942-3737615,
3739154-3739203,3739903-3739943,3740721-3740860,
3740903-3741183,3741405-3741613
Length = 683
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 222 WSTGSDLTEPCPLVKLILIQRIPASIRFFLRLIEGRWC 335
W D CPL K+I R PA +FF+ L C
Sbjct: 158 WKAAPDGRMKCPLGKIIWKSRAPARCKFFMFLAMRNAC 195
>08_02_1088 + 24247781-24249043
Length = 420
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = -2
Query: 396 YSPERTSSITVASKSTITTLGTIFPRSASEKNVLKQESAVLGSVSQAGRVPSGRIPCSKQ 217
Y+ + ++TV KS T P ++ E K +A + S AG+ + K+
Sbjct: 83 YAAAKADAVTVTKKSPAAKADT--PTTSKESAAGKANAATVAKKSPAGKADTSATATGKE 140
Query: 216 YSCQHATPI 190
Y+ A I
Sbjct: 141 YAAAKADAI 149
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -2
Query: 429 VINCSG*YSWRYSPERTSSITVASKSTITTLGTIFPRSASEKNVLKQESAVLGSV 265
V+ + Y+WR E + A+ + T G + ASE+++ K E AVLG +
Sbjct: 148 VLRAATQYNWR---ESLAGFGEAAVEVLKTEGDMLSEGASEEDMRKIEQAVLGGM 199
>03_02_0762 -
10968888-10969466,10972522-10974175,10974277-10974359,
10974435-10974533,10974620-10974706,10974782-10974838,
10974939-10975065,10975344-10975465,10975685-10975732,
10975867-10976268
Length = 1085
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Frame = +2
Query: 224 EHGIRPDGTLPA--CET---DPNTADSCFNTFFSEADRGKMVP--RVVMVDLEATVIDEV 382
E G P PA CE + + SC ++ RGK++P + + DLE + E+
Sbjct: 95 EDGAAPPPPPPAGRCEEGSEEGEVSGSCVKGLSTDGGRGKLIPPHKGIERDLEGNKLGEL 154
Query: 383 -RSGEYRQLYHPEQLITGKEDAANNYA 460
R G + + P ITG+ D ++ +A
Sbjct: 155 HRKGLFEKTTAP---ITGQGDRSHQHA 178
>09_06_0262 - 21921647-21922796,21922897-21923423
Length = 558
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 312 SEKNVLKQESAVLGSVSQAGRVPSGRIPCSKQYSCQHAT 196
SEKN +K E+A ++ P R+P K C H T
Sbjct: 250 SEKNAMKSETASW-VLANTKHCPKCRLPIEKNRGCMHMT 287
>09_01_0046 + 820503-820795,821734-821914
Length = 157
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 288 ESAVLGSVSQAGRVPSGRIPCSKQYSCQHATP 193
E A S +AG+ R PC+ YSCQ P
Sbjct: 81 EEAAATSALKAGKESDVRAPCACAYSCQGTWP 112
>01_01_0834 + 6522709-6523452
Length = 247
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 314 ADRGKMVPRVVMVDL---EATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGR 484
A R + V R ++ L E V+D VRSG YR ++ + GK + RG R
Sbjct: 110 AHRARAVARSLVSALQPEEVLVLDAVRSGAYRGRLAADEPVEGKLETRAARGRGGVGAAR 169
Query: 485 EV 490
V
Sbjct: 170 GV 171
>07_03_1310 -
25673140-25673418,25673837-25674082,25674189-25674465,
25675474-25675751,25675845-25676378
Length = 537
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 470 SALSRSYSPRLLYQLSTVQGDTVGGIHRNELRL*Q*PLNQPSRPSAPSSLDQPQKK 303
+A S + PRL ++ TV +H + P+ ++ S+PS++ P+KK
Sbjct: 16 AAASSAPQPRLAATFLPMRRRTVSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKK 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,316,338
Number of Sequences: 37544
Number of extensions: 304235
Number of successful extensions: 985
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -