Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l09
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P80681 Cluster: Larval cuticle protein A1A; n=6; Endopt...    34   3.1  
UniRef50_UPI00015B5629 Cluster: PREDICTED: similar to Cuticle pr...    33   5.5  
UniRef50_Q8MRD2 Cluster: RE04513p; n=2; Drosophila melanogaster|...    33   5.5  
UniRef50_Q4Z1F4 Cluster: Putative uncharacterized protein; n=2; ...    33   5.5  
UniRef50_UPI0000E478E3 Cluster: PREDICTED: similar to KIAA1622 p...    33   7.2  
UniRef50_Q9BPR3 Cluster: Cuticle protein; n=1; Bombyx mori|Rep: ...    33   7.2  

>UniRef50_P80681 Cluster: Larval cuticle protein A1A; n=6;
           Endopterygota|Rep: Larval cuticle protein A1A - Tenebrio
           molitor (Yellow mealworm)
          Length = 174

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 29/93 (31%), Positives = 39/93 (41%)
 Frame = +1

Query: 31  SLIYVFPPALLIRTESYILITANVDDVQALAKQIVASPVAGQLSKMVRRAASIFNREFGR 210
           SL+   P A +    +Y    A V    A A     + VA  ++     A ++   E+  
Sbjct: 28  SLLRAAPIARVASPLAYAAPVARVAAPLAYAAPYARAAVAAPVAV----AKTVVADEYDP 83

Query: 211 YPNYHPGYDIQDAKRRSSKLIVEDIPRDPVQGS 309
            P Y  GYD+QD     SK  VE    D VQGS
Sbjct: 84  NPQYSFGYDVQDGLTGDSKNQVESRSGDVVQGS 116


>UniRef50_UPI00015B5629 Cluster: PREDICTED: similar to Cuticle
           protein 21 (LM-ACP 21); n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to Cuticle protein 21 (LM-ACP 21) -
           Nasonia vitripennis
          Length = 344

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 20/72 (27%), Positives = 28/72 (38%)
 Frame = +1

Query: 94  ANVDDVQALAKQIVASPVAGQLSKMVRRAASIFNREFGRYPNYHPGYDIQDAKRRSSKLI 273
           AN   +     Q+ A+PV               + E+  +P Y   YD+QD     SK  
Sbjct: 15  ANAGAIHQSVAQVAAAPVLYSAPVAKTVVTKTVDAEYDPHPQYSYSYDVQDQLTGDSKSQ 74

Query: 274 VEDIPRDPVQGS 309
            E    D V+GS
Sbjct: 75  EEQRDGDSVRGS 86


>UniRef50_Q8MRD2 Cluster: RE04513p; n=2; Drosophila
           melanogaster|Rep: RE04513p - Drosophila melanogaster
           (Fruit fly)
          Length = 206

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +1

Query: 133 VASPVAGQLSKMVRRAASIFNREFGRYPNYHPGYDIQDAKRRSSKLIVEDIPRDPVQG 306
           +A   AG +      AA     E+  +P Y  GYD++DA    SK  VE    D VQG
Sbjct: 28  IAVASAGIIPAAAPLAAVAQVEEYDPHPQYTYGYDVKDAISGDSKTQVETREGDVVQG 85


>UniRef50_Q4Z1F4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 979

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = -3

Query: 203 NSLLKILAALRTILLNCPATGEATICLAKACT 108
           N+LL+ LA+++ + +N P T + T+CL+  C+
Sbjct: 750 NNLLENLASIKNLYINSPKTQQGTMCLSFTCS 781


>UniRef50_UPI0000E478E3 Cluster: PREDICTED: similar to KIAA1622
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to KIAA1622 protein -
           Strongylocentrotus purpuratus
          Length = 792

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 290 VIPFRAARTTVHMRPKNWVMTTNQLHDLETIQRNIPIDKFQKHIYVILFVLRSCH-VLPF 466
           +IP   A  ++    +NW +  + L  L  + + +  D+       + F L + H  LP 
Sbjct: 453 LIPAILAAESIAANSRNWRLHVDILDKLACLPKCLTSDQIHSKFVPLFFKLVTTHRALPI 512

Query: 467 ERWGSRRACAL 499
           +R  SR  CAL
Sbjct: 513 QRAASRTLCAL 523


>UniRef50_Q9BPR3 Cluster: Cuticle protein; n=1; Bombyx mori|Rep:
           Cuticle protein - Bombyx mori (Silk moth)
          Length = 203

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +1

Query: 121 AKQIVASPVA--GQLSKMVRRAASIFNREFGRYPNYHPGYDIQDAKRRSSKLIVEDIPRD 294
           A  I ASPVA     +K+   A      E+  +P Y   YD+QD+    SK   E    D
Sbjct: 45  AHLIHASPVAYAAPFAKVAAVAPVAKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGD 104

Query: 295 PVQGS 309
            VQGS
Sbjct: 105 VVQGS 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,847,125
Number of Sequences: 1657284
Number of extensions: 11403943
Number of successful extensions: 29541
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29534
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)