Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l08
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    32   0.005
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   1.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.7  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   6.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   6.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
 Frame = -2

Query: 456 SVHHLFFTKIISFNLHFL*CLISSVLYPLASACFRMIVTQIVHVIPKCLIFGARDIFKVF 277
           +VH LF+   I F +HFL C        +   C        + +    L+F    +  ++
Sbjct: 80  TVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFI-IFTVHLLF----LLCIY 134

Query: 276 YVIRS*IFSELHEEFYR*SFINFKGHLQFLTCPYRLFISMGILKGYI--CTSY*VVNDIS 103
           Y +   +F  L   ++  +FI F  HL FL C Y  F +  I   ++  C ++     I 
Sbjct: 135 YFVVP-LFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAF-----IF 188

Query: 102 YRIHFTFVEFIF*INVDFFHCH 37
           + +H  F+     + +D+F  H
Sbjct: 189 FNMHLLFL-----LCLDYFTLH 205


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 472 EQLVGQYLTDEEIKERDRITENASFLNLILE 564
           E  V Q +  +EI + DR+T+N  +L+ ILE
Sbjct: 20  EYTVPQNIDIDEILKNDRLTKN--YLDCILE 48


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 216 INFKGHLQFLTCPYRLFISMGILKGYICTSY*VVN 112
           ++F  +L F+    +LF SM I+KG + T+Y +++
Sbjct: 168 VSFATNLYFIII--QLFGSMKIVKGTLKTAYYLIS 200


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +1

Query: 256 YLAPNHIKYFENISSSK----DQTFRNYVHYLSDYHSETSRRKRIKNRRYKALQ 405
           + A  +   ++NI  ++    D+  +NYV+ L D    +   + +KN    ALQ
Sbjct: 17  FAADKYTTKYDNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELKNNLADALQ 70


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +1

Query: 256 YLAPNHIKYFENISSSK----DQTFRNYVHYLSDYHSETSRRKRIKNRRYKALQ 405
           + A  +   ++NI  ++    D+  +NYV+ L D    +   + +KN    ALQ
Sbjct: 17  FAADKYTTKYDNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELKNNLADALQ 70


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 299 LEIFSKYFM*LGAKYFPNCMR 237
           L IF  YF+   A Y  NC+R
Sbjct: 327 LAIFILYFICDEAHYASNCLR 347


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 552 LNIGNCRSQPHERGEECANARRRYS 626
           LN+ +C+  P + G  C +    +S
Sbjct: 221 LNVDDCKPNPCQNGGTCHDLVNSFS 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,442
Number of Sequences: 336
Number of extensions: 2778
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)