Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20l08
(628 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 27 1.7
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 27 2.9
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 26 3.9
SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomy... 26 3.9
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 26 3.9
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 5.1
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 5.1
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 25 6.8
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 25 6.8
SPBC11G11.01 |fis1||mitochondrial fission protein Fis1 |Schizosa... 25 6.8
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 25 6.8
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 9.0
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 9.0
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 9.0
SPCC338.13 |cog4||Golgi transport complex subunit Cog4 |Schizosa... 25 9.0
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 9.0
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 25 9.0
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 25 9.0
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 1.7
Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 1/118 (0%)
Frame = +1
Query: 277 KYFENISSSKDQTFRNYVHYLSDYHSETSRRKRIKNRRYKALQKMKIK-TDYFSEKQMMY 453
+Y SS F + S YH+ T RRK R+ + K +E++ +
Sbjct: 158 QYSSQERSSSYNNFEDASSPQSSYHTPTKRRKNAVPRKSSSPPLSSTKHAPQSTERRPVR 217
Query: 454 RNPLLYEQLVGQYLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIH 627
R+ +Q G+ L + + I+ L + V + M N E H
Sbjct: 218 RSESRLKQTNGEPLVKHDTLDSSDISREGEQLYCYCQQVSYGQMIGCDNENCKREWFH 275
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 295 SSSKDQTFRNYVHYLSDYHSETSRRKRIKNRRYKALQKMKIKTDYFSEK 441
S + + + ++V + D HS S+RK++ ++ +KT F K
Sbjct: 17 SKTPETEYDSHVDSIEDIHSLASKRKKLNEKKENLEDLTLLKTSAFELK 65
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 3.9
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Frame = +1
Query: 43 MEKININLKNKFNESEVNPVTDIIDY----LVRSANISF-KNSHANEQPVRTCEKLQMAL 207
+EK+ +FNE E V + + ++ N++ K E+ + E L+ +
Sbjct: 73 LEKLENIYVERFNEKEPRDVRISLTFQPNEYLQDDNLTLVKEVRIKEEKAKDDEGLEKKI 132
Query: 208 EIYKRSPVEF-------LMQFGKYLAPNHIKYFENISSSKDQTF 318
Y PV+ L + K L PN YF+ +D F
Sbjct: 133 TKYTSQPVDIHWKPGKSLFRKNKKLPPNFFDYFQWTGEEEDDDF 176
>SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 115 DYLVRSANISFKNSHANEQPVRTCEKLQMALEI 213
D+LV + +S N H E RTC++ ++ L I
Sbjct: 86 DFLVDAVFVSESNHHEKEILHRTCKRYRIPLNI 118
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 187 EKLQMALEIYKRSPVEFLMQFGK--YLAPNHIKYFENISSSKD 309
EK +++ V + M GK + APNH++ I +KD
Sbjct: 224 EKYDAKADLWSVGAVLYEMAVGKPPFKAPNHVELLRRIQKAKD 266
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.8 bits (54), Expect = 5.1
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +1
Query: 283 FENISSSKDQTFRNYVHYLSDYHSETSRRKRIKNRRYKALQKMKIKTDY---FSEKQMMY 453
+ + + +TFR + H SD HS R A+ MK+ + ++ K+ +
Sbjct: 269 YAQLYQQRCKTFRPF-HLPSDVHSLDYER---------AILGMKLSCGFEILYNSKENVE 318
Query: 454 RNPLLYEQLVGQYL-TDEEIKERDRITENASFLNL 555
+ + E L Q L TDE+IK+ I ++ SF+N+
Sbjct: 319 KRTEIDEYLQIQPLPTDEDIKKIPLIEDDTSFMNV 353
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 316 FRNYVHYLSDYHSETSRRKRIKNRRY 393
F+ Y+H +S ++ S++KR RRY
Sbjct: 75 FQPYLHEISQEYARYSKQKRASLRRY 100
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 25.4 bits (53), Expect = 6.8
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +1
Query: 34 VMTMEKININLKNKFNESEVNPVTDIIDYLVRSANISFKNSHANEQPVRTCEKLQMALEI 213
+ ++ K IN+ + D I + N +K + N++ + + L+I
Sbjct: 511 IQSLRKCLINVLEYTMSKNLQHTADSIRTELEECNYQYKVQY-NDRVLTADSYIAEGLDI 569
Query: 214 YKRSPVEFLMQFGK 255
+K + EF +FGK
Sbjct: 570 FKAAFKEFTQKFGK 583
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 25.4 bits (53), Expect = 6.8
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Frame = +1
Query: 73 KFNESEVNPVTDIIDYLV---RSANISFKNSHANEQPVRTCEKLQMA-----LEIYKRSP 228
++ E V P+ + +V S + + S N++ R +L+ LEIYK SP
Sbjct: 145 EYLEGRVLPLQTVYMQMVDIQESMDRCYFESEVNKRKTRLGARLEQVMRDVELEIYKDSP 204
Query: 229 VEFLM-QFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSRRKRI 378
+E L Q Y + I+ ++ SK N + LS+ ++ R+RI
Sbjct: 205 LETLYNQIINYAETDEIR---RLTESKLLHMYNKLLILSEIKEKSHWRERI 252
>SPBC11G11.01 |fis1||mitochondrial fission protein Fis1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 25.4 bits (53), Expect = 6.8
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 193 LQMALEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSRRK 372
L + IYK SP E ++ Y+A +H K + S R Y++ L +
Sbjct: 63 LSLFCSIYKDSP-ERRLECLYYIALSHYKLKQYEES------RRYLNMLLSKDPNSPEAL 115
Query: 373 RIKNRRYKALQK 408
++KNR Y A+ K
Sbjct: 116 KLKNRLYDAVTK 127
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 397 PYIFCSLSSCVCLFPNDSHSNSARNS*MFDLWS*RY 290
P FC+L C F N H + ++ + WS +Y
Sbjct: 438 PSNFCALEVCALQFVNGVHKSVVKHLDEKETWSIKY 473
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 9.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 220 RSPVEFL-MQFGKYLAPNHIKYFEN--ISSSKDQTFRNYV-HYLSDYHSETSRRKRIKNR 387
R E+L M +G +AP H +YF N + K+ Y+ + L SE+ K +K+
Sbjct: 526 RGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKD- 584
Query: 388 RYKALQKMK 414
LQK+K
Sbjct: 585 ---VLQKLK 590
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 28 FIVMTMEKININLKNKFNESEVNPV 102
F++ +NI +KN++ E V PV
Sbjct: 671 FVITQFSDVNIEVKNEYFEKLVGPV 695
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 9.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 220 RSPVEFL-MQFGKYLAPNHIKYFEN--ISSSKDQTFRNYV-HYLSDYHSETSRRKRIKNR 387
R E+L M +G +AP H +YF N + K+ Y+ + L SE+ K +K+
Sbjct: 526 RGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKD- 584
Query: 388 RYKALQKMK 414
LQK+K
Sbjct: 585 ---VLQKLK 590
>SPCC338.13 |cog4||Golgi transport complex subunit Cog4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 738
Score = 25.0 bits (52), Expect = 9.0
Identities = 21/89 (23%), Positives = 34/89 (38%)
Frame = +1
Query: 193 LQMALEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSRRK 372
LQ+ + F M F +L P + + I S D NYV DY ET +
Sbjct: 555 LQLTVNFENLCKTSFNMYFPIFLLP---RIEQCIDDSFDGI--NYVLSYEDYTKETEHER 609
Query: 373 RIKNRRYKALQKMKIKTDYFSEKQMMYRN 459
+ R ++ + + E Q+ R+
Sbjct: 610 LVVTRLRSVWDRVLLLEQFTPENQLSLRS 638
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 9.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 220 RSPVEFL-MQFGKYLAPNHIKYFEN--ISSSKDQTFRNYV-HYLSDYHSETSRRKRIKNR 387
R E+L M +G +AP H +YF N + K+ Y+ + L SE+ K +K+
Sbjct: 526 RGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKD- 584
Query: 388 RYKALQKMK 414
LQK+K
Sbjct: 585 ---VLQKLK 590
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 157 HANEQPVRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNHIK 279
+AN + E+++ + KRS V +L + Y+APN ++
Sbjct: 99 NANSIKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLR 139
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 49 KININLKNKFNESEVNPVTDI--IDYLVRSANISFKNSHANEQPVRTCEKLQMALEI 213
KIN N+KN + E N + D+ D + R ++ F +AN+ + ++ + LE+
Sbjct: 368 KINTNIKNLDDYGEGNRLDDVDAEDKIARKRSLKF---YANQIDQKAAKRSRAVLEL 421
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,334,333
Number of Sequences: 5004
Number of extensions: 45029
Number of successful extensions: 160
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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