Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l07
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003385-5|AAB54245.1|  494|Caenorhabditis elegans Hypothetical ...    29   3.2  
U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z93393-11|CAB07698.2|  536|Caenorhabditis elegans Hypothetical p...    28   5.7  
AF088285-1|AAC98292.1|  536|Caenorhabditis elegans caspase-relat...    28   5.7  
U40947-1|AAC48068.1|  610|Caenorhabditis elegans Hypothetical pr...    28   7.5  
L13200-8|AAA28188.2|  324|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>AF003385-5|AAB54245.1|  494|Caenorhabditis elegans Hypothetical
           protein R08F11.3 protein.
          Length = 494

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 139 YLLFKKYCKIIVKNPWLTNMDNLKNGDNVLIIWKNDSQGNITSLIEDVKKVIQSDT 306
           +   K Y +I V  PW+  +   K+ D+VL  WK+ S     S IE+ +  I  DT
Sbjct: 209 FATLKIYVEIFV--PWIGKLLPGKSLDDVLNYWKDTSYEFFNSQIENHRLKIDFDT 262


>U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical
           protein F55F8.3 protein.
          Length = 910

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 160 CKIIVKNPWLTNMDNLKNGDNVLIIWKNDSQG-NITSLIEDVKKVIQSDTVVLENSDMIT 336
           CK  + N W  N   L+ G+ V  IWK D +G +   ++ED ++ ++           ++
Sbjct: 209 CKRGLANVWTCN---LRPGELVEGIWKKDEEGSDDIEMLEDGEQKVEKIFFEKTKKYWLS 265

Query: 337 EGSREHSSFDVVLSNW 384
           E S    S DV  + +
Sbjct: 266 ESSGSGKSVDVTAARF 281


>Z93393-11|CAB07698.2|  536|Caenorhabditis elegans Hypothetical
           protein Y48E1B.13a protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 207 EKRRQCSYYLEERQSRKHYEPNRRRKKSNSK-*YC 308
           E R  CSY LEE  S+    P    KKSN K  YC
Sbjct: 251 ETRHDCSYSLEEYDSQSRM-PRTDAKKSNHKHKYC 284


>AF088285-1|AAC98292.1|  536|Caenorhabditis elegans caspase-related
           protein 1A protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 207 EKRRQCSYYLEERQSRKHYEPNRRRKKSNSK-*YC 308
           E R  CSY LEE  S+    P    KKSN K  YC
Sbjct: 251 ETRHDCSYSLEEYDSQSRM-PRTDAKKSNHKHKYC 284


>U40947-1|AAC48068.1|  610|Caenorhabditis elegans Hypothetical
           protein R03E9.2 protein.
          Length = 610

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 386 YLPTVSHILINYWQ*SLNYSNQMVNLYSK 472
           Y+P VS I++N W  ++N    M N +S+
Sbjct: 315 YIPNVSTIILNSWMSTINELGYMGNRFSE 343


>L13200-8|AAA28188.2|  324|Caenorhabditis elegans Hypothetical
           protein ZK1236.7 protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 207 EKRRQCSYYLEERQSRKHYEPNRRRKKSNSK 299
           EKR+   Y + ER+ RK  E  R +K+   +
Sbjct: 144 EKRQMREYEVREREERKRREEEREKKRDEER 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,516,323
Number of Sequences: 27780
Number of extensions: 313227
Number of successful extensions: 891
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)