Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l06
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113314-1|AAM29319.1|  159|Drosophila melanogaster AT27976p pro...    33   0.16 
AE014134-2734|AAF53542.1|  159|Drosophila melanogaster CG5968-PA...    33   0.16 
X96975-1|CAA65661.1|  797|Drosophila melanogaster RBF protein.         28   8.0  
AY089532-1|AAL90270.1|  845|Drosophila melanogaster LD02906p pro...    28   8.0  
AY047549-1|AAK77281.1|  722|Drosophila melanogaster GH05946p pro...    28   8.0  
AL031583-5|CAA20903.1|  845|Drosophila melanogaster EG:34F3.3,FB...    28   8.0  
AE014298-109|AAF45551.1|  845|Drosophila melanogaster CG7413-PA ...    28   8.0  

>AY113314-1|AAM29319.1|  159|Drosophila melanogaster AT27976p
           protein.
          Length = 159

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 24/66 (36%), Positives = 35/66 (53%)
 Frame = +2

Query: 128 FNTGEIVLSAIKKLMKNTGWTTRTIIKFIKLEYSISDPKINRKVSRTLKRGVRLGLLQME 307
           FN G I++  ++ L+K    T R I+  I     +S  ++   V +TL+ G RLG LQ  
Sbjct: 4   FN-GAIIVHTLQ-LLKAPA-TLREIVVTIAKNTELSQDELKEPVKQTLEMGHRLGFLQKL 60

Query: 308 RGRYRL 325
            GRY L
Sbjct: 61  DGRYFL 66


>AE014134-2734|AAF53542.1|  159|Drosophila melanogaster CG5968-PA
           protein.
          Length = 159

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 24/66 (36%), Positives = 35/66 (53%)
 Frame = +2

Query: 128 FNTGEIVLSAIKKLMKNTGWTTRTIIKFIKLEYSISDPKINRKVSRTLKRGVRLGLLQME 307
           FN G I++  ++ L+K    T R I+  I     +S  ++   V +TL+ G RLG LQ  
Sbjct: 4   FN-GAIIVHTLQ-LLKAPA-TLREIVVTIAKNTELSQDELKEPVKQTLEMGHRLGFLQKL 60

Query: 308 RGRYRL 325
            GRY L
Sbjct: 61  DGRYFL 66


>X96975-1|CAA65661.1|  797|Drosophila melanogaster RBF protein.
          Length = 797

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 181 SVFHE-FLDCRQNDLPRVECIIYFSHYTYTVL 89
           SV+ E F+D  ++  P+V+ II+F ++TY  L
Sbjct: 672 SVYREVFIDINEDGEPKVKDIIHFYNHTYVPL 703


>AY089532-1|AAL90270.1|  845|Drosophila melanogaster LD02906p
           protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 181 SVFHE-FLDCRQNDLPRVECIIYFSHYTYTVL 89
           SV+ E F+D  ++  P+V+ II+F ++TY  L
Sbjct: 672 SVYREVFIDINEDGEPKVKDIIHFYNHTYVPL 703


>AY047549-1|AAK77281.1|  722|Drosophila melanogaster GH05946p
           protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 181 SVFHE-FLDCRQNDLPRVECIIYFSHYTYTVL 89
           SV+ E F+D  ++  P+V+ II+F ++TY  L
Sbjct: 549 SVYREVFIDINEDGEPKVKDIIHFYNHTYVPL 580


>AL031583-5|CAA20903.1|  845|Drosophila melanogaster
           EG:34F3.3,FBgn0015799;Rbf protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 181 SVFHE-FLDCRQNDLPRVECIIYFSHYTYTVL 89
           SV+ E F+D  ++  P+V+ II+F ++TY  L
Sbjct: 672 SVYREVFIDINEDGEPKVKDIIHFYNHTYVPL 703


>AE014298-109|AAF45551.1|  845|Drosophila melanogaster CG7413-PA
           protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 181 SVFHE-FLDCRQNDLPRVECIIYFSHYTYTVL 89
           SV+ E F+D  ++  P+V+ II+F ++TY  L
Sbjct: 672 SVYREVFIDINEDGEPKVKDIIHFYNHTYVPL 703


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,690,495
Number of Sequences: 53049
Number of extensions: 391265
Number of successful extensions: 830
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)