Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l04
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.9  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +2

Query: 161 PPTNTFPYKIAKRLNILSVPRKYIIDTGEGMPAYTPRGIRKSALNSQLSDRVHDVSWPYL 340
           P   T PY++ K   +  VP        EG+  Y    I  +AL + L D  ++   P L
Sbjct: 295 PVLPTHPYQMIKNQQVYDVPWIVSFTNSEGL--YAINEIYDNALLALLDDYWNEYIPPIL 352


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +2

Query: 161 PPTNTFPYKIAKRLNILSVPRKYIIDTGEGMPAYTPRGIRKSALNSQLSDRVHDVSWPYL 340
           P   T PY++ K   +  VP        EG+  Y    I  +AL + L D  ++   P L
Sbjct: 295 PVLPTHPYQMIKNQQVYDVPWIVSFTNSEGL--YAINEIYDNALLALLDDYWNEYIPPIL 352


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 670 LEHWSRRYLHEPW 632
           L++   +Y+HEPW
Sbjct: 449 LKNMPSQYIHEPW 461


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 21/82 (25%), Positives = 31/82 (37%)
 Frame = +2

Query: 161 PPTNTFPYKIAKRLNILSVPRKYIIDTGEGMPAYTPRGIRKSALNSQLSDRVHDVSWPYL 340
           P   T PY+I K   +  VP        EG+  Y          N+QL  R+ D    Y+
Sbjct: 295 PVLPTHPYQIIKNQQVYDVPWIASFTKSEGL--YH----LDEVYNNQLLTRLDDNWNKYI 348

Query: 341 RRFLILKKTYKQRFNEERLERI 406
              L    T  +   +E  ++I
Sbjct: 349 PAILYYNYTVDRDLQDEVSQKI 370


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 21/82 (25%), Positives = 31/82 (37%)
 Frame = +2

Query: 161 PPTNTFPYKIAKRLNILSVPRKYIIDTGEGMPAYTPRGIRKSALNSQLSDRVHDVSWPYL 340
           P   T PY+I K   +  VP        EG+  Y          N+QL  R+ D    Y+
Sbjct: 295 PVLPTHPYQIIKNKQVYDVPWIASFTKSEGL--YH----LDEVYNNQLLTRLDDNWNKYI 348

Query: 341 RRFLILKKTYKQRFNEERLERI 406
              L    T  +   +E  ++I
Sbjct: 349 PAILYYNYTVDRDLQDEVSQKI 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,402
Number of Sequences: 336
Number of extensions: 3747
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)