Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20l04
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         28   5.9  
04_04_0923 + 29441740-29441980,29442321-29442401,29442630-294427...    28   5.9  
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178...    28   5.9  
03_03_0050 - 14086954-14087079,14087152-14088045                       28   5.9  
05_02_0157 + 7171791-7172030,7172635-7172667,7172966-7173037,717...    28   7.7  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 566  PKRDFRPPPAKRGQSKPL-EALLPRLMQISSRPMF 667
            PK++  PPPAK  ++ P  E+  P  M+  + P F
Sbjct: 1340 PKQESLPPPAKEAEAPPAKESKPPPAMEAEAPPAF 1374


>04_04_0923 +
           29441740-29441980,29442321-29442401,29442630-29442719,
           29443123-29443203,29443721-29443774,29444062-29444111,
           29444542-29444623,29444734-29444838,29445514-29445641,
           29445726-29445797,29445887-29445937,29446029-29446100,
           29446201-29446278,29446446-29447270,29447648-29448556
          Length = 972

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 KIAKRLNILSVPRKYIID 238
           KI   LNI+ +P+KYIID
Sbjct: 881 KIMLHLNIMKIPKKYIID 898


>03_05_0226 -
           22115285-22115404,22115477-22116661,22117037-22117861,
           22118029-22118106,22118370-22118420,22118510-22118581,
           22118666-22118667,22119453-22119557,22119668-22119749,
           22120178-22120227,22120514-22120567,22121084-22121164,
           22121567-22121656,22121884-22121964,22122304-22122544
          Length = 1038

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 KIAKRLNILSVPRKYIID 238
           KI   LNI+ +P+KYIID
Sbjct: 815 KIMLHLNIMKIPKKYIID 832


>03_03_0050 - 14086954-14087079,14087152-14088045
          Length = 339

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 KIAKRLNILSVPRKYIID 238
           KI   LNI+ +P+KYIID
Sbjct: 114 KIMLHLNIMKIPKKYIID 131


>05_02_0157 +
           7171791-7172030,7172635-7172667,7172966-7173037,
           7175212-7175310,7176135-7176194,7176347-7176463
          Length = 206

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 320 DVSWPYLRRFLILKKTYKQRFNEERLERI 406
           D+ W Y   F+IL+K YK R++ E++ ++
Sbjct: 77  DMLWSYKNNFIILEKIYK-RWDTEKISQM 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,532,184
Number of Sequences: 37544
Number of extensions: 411252
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)