Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20l02
(690 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 24 1.0
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 24 1.3
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 24 1.3
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 22 4.1
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 22 5.4
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 5.4
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 5.4
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 9.5
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 9.5
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.5
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 24.2 bits (50), Expect = 1.0
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 415 KLNILTQDQIQLRMQ-MLDLSRKIFLILPISGWVIILTFSKVYHRILYHTFVHLQ*EWQV 239
K LT I+L Q + + L +S V++ +SK +HR H + L +
Sbjct: 14 KFFALTPRSIKLEKQTFIQKFYAVAFFLALSIGVVVSIYSKSFHRNEIHIKIVLMFFKEA 73
Query: 238 HLWRFHY 218
L+ F+Y
Sbjct: 74 SLYCFNY 80
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 654 YITIVVKINLGFRENFLSQ 598
YI V K+N G +NFLSQ
Sbjct: 201 YIKQVCKLNNGHYKNFLSQ 219
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 654 YITIVVKINLGFRENFLSQ 598
YI V K+N G +NFLSQ
Sbjct: 26 YIKQVCKLNNGHYKNFLSQ 44
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 630 NLGFRENFLSQRTFIF 583
NLG R NF + FIF
Sbjct: 434 NLGMRRNFRKKLDFIF 449
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 175 LCGHKDKGLVLGVYYNENAKG 237
+CG + G GVY E KG
Sbjct: 88 ICGDRASGKHYGVYSCEGCKG 108
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 349 IFLILPISGWVIILTFSKVYHRIL 278
IF+ + + WVIIL + + RI+
Sbjct: 98 IFIFVNVFFWVIILMSNYAFTRII 121
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 687 FSLHLTYMPTIY 652
F+LHL ++P IY
Sbjct: 202 FTLHLLFLPCIY 213
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 132 LCAIRNAAQNKGSETLWS 185
+ RNA Q G E WS
Sbjct: 388 MVGFRNAVQGTGIENWWS 405
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 132 LCAIRNAAQNKGSETLWS 185
+ RNA Q G E WS
Sbjct: 389 MVGFRNAVQGTGIENWWS 406
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 132 LCAIRNAAQNKGSETLWS 185
+ RNA Q G E WS
Sbjct: 389 MVGFRNAVQETGIENWWS 406
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 307 LKLSPIPKLGESRIFFDLDP 366
+++S KLG++ + DLDP
Sbjct: 1537 IQVSNNVKLGQNFVLLDLDP 1556
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,734
Number of Sequences: 336
Number of extensions: 4001
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -