Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20k23
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81550-1|CAB04480.1|  269|Caenorhabditis elegans Hypothetical pr...    71   7e-13
AL117202-12|CAB55074.1|  274|Caenorhabditis elegans Hypothetical...    59   2e-09
U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical pr...    43   2e-04
U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical pr...    43   2e-04
AF068708-2|AAC17753.1|  464|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z66567-1|CAA91491.1|  887|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z81550-1|CAB04480.1|  269|Caenorhabditis elegans Hypothetical
           protein F55F3.1 protein.
          Length = 269

 Score = 70.9 bits (166), Expect = 7e-13
 Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
 Frame = +2

Query: 422 DDIKVLPTVFKWEGGG---KQVFISGTFTDWKT-IPMVKSHGDFVTIIDLPEGEHQYKYF 589
           DD    P VFKW       +QV+I G++  W T IP+VKS  DF TI+DL  G+H+YK+ 
Sbjct: 52  DDKSKFPVVFKWNINNATPRQVYICGSWDGWNTKIPLVKSTSDFSTIVDLEPGKHEYKFM 111

Query: 590 VDGEWRHDPTVKVIDNGMGSK 652
           VD +W  D   +   N +G +
Sbjct: 112 VDSKWVVDDNQQKTGNNLGGE 132


>AL117202-12|CAB55074.1|  274|Caenorhabditis elegans Hypothetical
           protein Y47D3A.15 protein.
          Length = 274

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 5/60 (8%)
 Frame = +2

Query: 440 PTVFKWE----GGGKQVFISGTFTDWKT-IPMVKSHGDFVTIIDLPEGEHQYKYFVDGEW 604
           P VF+W        + V I G++ +W+T IPMVKS  DF TIIDL  G+++YK+ VDG W
Sbjct: 62  PVVFRWSFTQNAQPRVVHIVGSWDNWQTRIPMVKSTNDFSTIIDLQPGQYEYKFQVDGSW 121


>U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical
           protein F46H5.7b protein.
          Length = 575

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +2

Query: 470 KQVFISGTFTDWK-TIPMVKS-HGDFVTIIDLPEGEHQYKYFVDGEWRHDPTVKVIDNGM 643
           ++V+++G+F +WK T+   K   G     ++L  G H++++ ++GEW      + + NG+
Sbjct: 506 QEVYLTGSFINWKCTLKCEKLVSGKKGVTVNLTRGRHEFRFMINGEWATSSDYQQVPNGL 565

Query: 644 GSK 652
           G +
Sbjct: 566 GGQ 568


>U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical
           protein F46H5.7a protein.
          Length = 572

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +2

Query: 470 KQVFISGTFTDWK-TIPMVKS-HGDFVTIIDLPEGEHQYKYFVDGEWRHDPTVKVIDNGM 643
           ++V+++G+F +WK T+   K   G     ++L  G H++++ ++GEW      + + NG+
Sbjct: 503 QEVYLTGSFINWKCTLKCEKLVSGKKGVTVNLTRGRHEFRFMINGEWATSSDYQQVPNGL 562

Query: 644 GSK 652
           G +
Sbjct: 563 GGQ 565


>AF068708-2|AAC17753.1|  464|Caenorhabditis elegans Hypothetical
           protein C18G1.6 protein.
          Length = 464

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 501 SVNVPEINTCFPPPSHLKTVGNTLISSTILLPSVRVFDLSRC 376
           ++N  +IN+ FP    +K   N  +      P +R+F LSRC
Sbjct: 44  TINTDQINSSFP----IKFYHNAYVDYRYETPRLRIFALSRC 81


>Z66567-1|CAA91491.1|  887|Caenorhabditis elegans Hypothetical
           protein ZK455.1 protein.
          Length = 887

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 362 IEYTEQRERSNTLTDGSKIVDDIKVLP 442
           IE+   RER N L  GSK  D++ ++P
Sbjct: 143 IEFERNRERFNFLKWGSKAFDNLLIVP 169


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 502  ICKCSRNKYLFSTSFPFENCW*YFNIVD 419
            IC    NKYL    F F+N   +FN+ D
Sbjct: 5363 ICSTGNNKYLLKNPFGFDNK--FFNLTD 5388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,656,080
Number of Sequences: 27780
Number of extensions: 318979
Number of successful extensions: 887
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)