Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20k19
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075477-1|AAL68289.1|  596|Drosophila melanogaster RE36966p pro...   122   4e-28
AE014296-2534|AAF49618.1|  596|Drosophila melanogaster CG7739-PA...   122   4e-28
BT029428-1|ABK57085.1|  710|Drosophila melanogaster IP09654p pro...    29   7.3  

>AY075477-1|AAL68289.1|  596|Drosophila melanogaster RE36966p
           protein.
          Length = 596

 Score =  122 bits (294), Expect = 4e-28
 Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = +3

Query: 222 EGIIAAFGDFNSDELTDAFVIKNS-STVNVFLAYDKEPFLRPSEFACNFSDIVITSIVPG 398
           EGI+AAFGDFNSDELTD FVI++    + +   +  EP L+     C + D  I S++PG
Sbjct: 33  EGIVAAFGDFNSDELTDVFVIRDGMKRLQILFGHYTEPLLKLGP-DCQYGDKTIVSVIPG 91

Query: 399 DYDGDAYMDILLTTQNVNNTSKFHNVSILWGGMPTLNCSDALQTKAITFEQPLVMDYNRD 578
           D+DGDA MD+L+  +  +  +  + V I WG    L CS+  ++   +  + + +D+NRD
Sbjct: 92  DFDGDALMDVLVNLKGKDEET--YEVHINWGNTTELKCSN--KSLFTSKGEVMALDFNRD 147

Query: 579 MILDLFGINVEGKRVFWIFDQSRNKP 656
           MI+DL+G++   +R FWIF+ SR  P
Sbjct: 148 MIIDLYGLDSAERRTFWIFNSSRLPP 173


>AE014296-2534|AAF49618.1|  596|Drosophila melanogaster CG7739-PA
           protein.
          Length = 596

 Score =  122 bits (294), Expect = 4e-28
 Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = +3

Query: 222 EGIIAAFGDFNSDELTDAFVIKNS-STVNVFLAYDKEPFLRPSEFACNFSDIVITSIVPG 398
           EGI+AAFGDFNSDELTD FVI++    + +   +  EP L+     C + D  I S++PG
Sbjct: 33  EGIVAAFGDFNSDELTDVFVIRDGMKRLQILFGHYTEPLLKLGP-DCQYGDKTIVSVIPG 91

Query: 399 DYDGDAYMDILLTTQNVNNTSKFHNVSILWGGMPTLNCSDALQTKAITFEQPLVMDYNRD 578
           D+DGDA MD+L+  +  +  +  + V I WG    L CS+  ++   +  + + +D+NRD
Sbjct: 92  DFDGDALMDVLVNLKGKDEET--YEVHINWGNTTELKCSN--KSLFTSKGEVMALDFNRD 147

Query: 579 MILDLFGINVEGKRVFWIFDQSRNKP 656
           MI+DL+G++   +R FWIF+ SR  P
Sbjct: 148 MIIDLYGLDSAERRTFWIFNSSRLPP 173


>BT029428-1|ABK57085.1|  710|Drosophila melanogaster IP09654p
           protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +1

Query: 271 TPSLLKIVQLSTFFLHMTKSLF*GHPNLH 357
           +P+LL+++ L  FF++ T  +   +PNL+
Sbjct: 75  SPALLRVIALGAFFIYCTNIVMYPNPNLY 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,458,768
Number of Sequences: 53049
Number of extensions: 564889
Number of successful extensions: 1233
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)