Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20k19
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical pr...    37   0.011
Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical
           protein ZK637.3 protein.
          Length = 599

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
 Frame = +3

Query: 225 GIIAAFGDFNSDELTDAFVIKNSS-TVN-----VFLAYDKEPFLRPSEFACN----FSDI 374
           G + AFGDFN+D  TD  V  N + T+N     +    +   F   + FA +     +D 
Sbjct: 29  GKVCAFGDFNADRNTDILVFANGTLTINYQETKLLDVLEASKFTPGTSFAISKPSLNADF 88

Query: 375 VITSIVPGDYDGDAYMDILLTTQN 446
           V  S+  GD++GD+ +D+L++ ++
Sbjct: 89  VECSV--GDFNGDSRLDVLVSIRD 110


>Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical
           protein C14B1.6 protein.
          Length = 793

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 LTTQNVNNTSKFHNVSILWGGMPTLNCSDAL 524
           LT   ++NT +FH +   +GG PT    D L
Sbjct: 631 LTELLLDNTIEFHTIIFAFGGTPTFKKQDFL 661


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,780,121
Number of Sequences: 27780
Number of extensions: 315409
Number of successful extensions: 739
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)