Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20k16
         (190 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   3.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   3.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   7.2  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    19   7.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               19   7.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    19   7.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   KRDRYPNL*PGNSNGRNY 54
           +RDRY NL   N  G+ +
Sbjct: 139 RRDRYTNLGLVNEQGQTW 156


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 151 NNDFKFQEMFLYIL 110
           NNDF F E+   IL
Sbjct: 391 NNDFNFDEVNFRIL 404


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 151 NNDFKFQEMFLYIL 110
           NNDF F ++   IL
Sbjct: 393 NNDFNFNDVNFRIL 406


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
          opsin protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 55 DSFSHWNFPAKDSDI 11
          + F  WN P + SD+
Sbjct: 27 EKFLGWNVPPEYSDL 41


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 90  LDKFANVRMYKNIS*NLKSL 149
           LDK   +   KNIS ++K L
Sbjct: 96  LDKLVEMANRKNISIDVKML 115


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
          protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 55 DSFSHWNFPAKDSDI 11
          + F  WN P + SD+
Sbjct: 27 EKFLGWNVPPEYSDL 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,085
Number of Sequences: 438
Number of extensions: 1038
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)